Job Description Q22146 Confidence 99.64% Date Sat Apr 13 13:24:31 BST 2013 Rank 402 Aligned Residues 84 % Identity 17% Template c3gxxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b Resolution 2.40 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.																																											.
Query SS confidence																					.	.																																											.
Query Sequence		A	E	Y	Y	H	G	M	V	P	R	Q	D	A	E	G	F	L	K	R	.	.	E	G	D	F	L	V	R	K	T	E	Q	M	P	G	K	V	V	L	A	M	S	V	R	V	T	D	E	L	C	R	H	F	M	L	N	M	D	P	T	S	N	K	.	F	Y	F	E	H	T	H	Q	E	S	T	I	S	E	L	I
Query Conservation																					.	.																																											.
Alig confidence							.														.	.																							.	.																			.
Template Conservation							.																																						.	.
Template Sequence		H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	.	.	D	K	D	L	F	Q	H	V	D	I	Q	E	X	E	K	E	X	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L	D	Q	I	I
Template Known Secondary structure			T	T	B		.												T	T	S		T	T									S	T	T										.	.		T	T																				S	S	S				S	S
Template Predicted Secondary structure							.																																						.	.
Template SS confidence
		10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	W	H	M	T	T	K	T	P	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	Y	L	Q	N	K	I	R	L
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D