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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank169Aligned Residues248
% Identity21%Templatec3dxnA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-like domain protein kinase isoform 3; PDBTitle: crystal structure of the calcium-dependent kinase from toxoplasma2 gondii, 541.m00134, kinase domain.
Resolution2.17 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140.........150.........160....... ..170.........180.........190.........200.........
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Query Sequence  VANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEA. . TREARLRFMKEARLMRKYQHKHVVKLIGVAIHEHPLMIVMEY
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Template Sequence  RYQRVKKLGSYGEVLLCKDK. . TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEV
Template Known Secondary structure  T


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GGGS


S
TT


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   22.......30.........40. ........50.........60.........70.........80.........90.........
 
   210......... 220.........230.........240.........250.........260.........270.........280........
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Query Sequence  CPNGSLLSHL. KKNKVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISDFGMSDNKDEIKDETLEKV
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Template Sequence  YRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSDALIKIVDFGL. . . . . SAHFERLG
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S
BSS

TTT


S


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STT
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TTT
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   103......110.........120.........130.........140.........150.........160......... 170.......
 
   289290.........300.........310.........320.........330.........340.........350 .........360......
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Query Sequence  PIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKMPD. . GTHPTVADVVTGTCWQ
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Template Sequence  TAYYIAPEVLR. KKYDEKCDVWSCGVILYILLC. GYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLV. KLMLT
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TTT

T.T


T.SS
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TTTTTTS
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   186...190...... ...200.........210....... ..220.........230.........240.........250....... ..260..
 
   367..370.........380. ........
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Query Sequence  KNPEKRSTMDSIHKK. . LREFYESK
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Template Sequence  YEPSKRISAEEALNHPWIVKFCSQK
Template Known Secondary structure  S
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   263......270.........280.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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