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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank176Aligned Residues249
% Identity20%Templatec3dbqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase ttk; PDBTitle: crystal structure of ttk kinase domain
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140.........150.........160....... ..170.........180...... ...190.........200.
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Query Sequence  LINHDSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEA. TREARLRFMKEARLMRKYQ. . HKHVVKLIGVAIHEH
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Template Sequence  SVKGRIYSILKQIGSGGSSKVFQVLN. . EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ
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   519520.........530.........540.... .....550.........560.........570.........580.........590......
 
   202.......210.........220.........230.........240.........250.........260.........270.........280.
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Query Sequence  PLMIVMEYCPNGSLLSHLKKNKVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISDFGMSDNKDEIK
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Template Sequence  YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD. GMLKLIDFGIA. . . . . . .
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   597..600.........610.........620.........630.........640.........650....... ..660........
 
   282.......290.........300.........310.........320.........330 .........340.........350.........360
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Query Sequence  DETLEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGL. TKIQTRAKIVVNDYRMKMPDGTHPTVADVV
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Template Sequence  . . NQMVGTVNYMPPEAIKDMSISPKSDVWSLGCILYYMTY. GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVL
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   669670.........680.........690.........700...... ...710.........720.........730.........740.....
 
   361........370.........380.........
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Query Sequence  TGTCWQKNPEKRSTMDSIHKKLREFYESK
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Template Sequence  . KCCLKRDPKQRISIPELLA. . HPYVQIQ
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   769770.........780....... ..790....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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