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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank202Aligned Residues215
% Identity27%Templatec3cokB_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine/threonine-protein kinase plk4; PDBTitle: crystal structure of plk4 kinase
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160....... ..170.........180.........190.........200......
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Query Sequence  DSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEA. . TREARLRFMKEARLMRKYQHKHVVKLIGVAIHEHPLMIV
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Template Sequence  EDFKVGNLLGKGSFAGVYRAE. SIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV
Template Known Secondary structure  GG
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   910.........20......... 30.........40.........50.........60.........70.........80.......
 
   207..210.........220... ......230.........240.........250.........260.........270.........280....
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Query Sequence  MEYCPNGSLLSHLKKNK. . VSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISDFGMSDNKDEIKDET
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Template Sequence  LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQ. . . . . . . .
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   88.90.........100.........110.........120.........130.........140.........150.........
 
   285....290.........300.........310.........320.........330.........340.........350.........360....
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Query Sequence  LEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKMPDGTHPTVADVVTGTC
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Template Sequence  . . . . . . . . . . . . . . . . . . LKLESDVWSLGCMFYTLLI. GRPPFNTLNK. . . . . . . . VVLADYEMPSFLSIEAKDLI. HQL
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   160.........170........ .180........ .190.........200........ .210.
 
   365....370.........380
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Query Sequence  WQKNPEKRSTMDSIHK
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Template Sequence  LRRNPADRLSLSSVLD
Template Known Secondary structure  S
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   245....250.........260
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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