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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank150Aligned Residues255
% Identity21%Templatec3c0hB_
PDB info PDB header:transferaseChain: B: PDB Molecule:peripheral plasma membrane protein cask; PDBTitle: cask cam-kinase domain- amppnp complex, p1 form
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150.........160.........170. ........180.........190.........200...
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Query Sequence  HDSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEATREA. . . . RLRFMKEARLMRKYQHKHVVKLIGVAIHEHPL
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Template Sequence  EDVYELCEVIGKGPFSVVRRCI. NRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML
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   910.........20.........30 .........40.........50.........60.........70.........80.......
 
   204.....210.........220.. .......230.........240.........250.........260. ........270.....
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Query Sequence  MIVMEYCPNGSLLSHLKKN. . . . . KVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLS. . . AKNELKISDFGMSD
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Template Sequence  YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAI
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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   276 ...280.........290.........300.........310.........320.........330.........340......... 350..
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Query Sequence  N. KDEIKDETLEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKMP. . DGT
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Template Sequence  QLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS. GCLPFYG. TKERLFEGIIKGKYKMNPRQWSHI
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   168.170.........180.........190.........200.........210.... .....220. ........230.........240.....
 
   353......360.........370.........380........
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Query Sequence  HPTVADVVTGTCWQKNPEKRSTMDSIHKKLREFYES
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Template Sequence  SESAKDLV. RRMLMLDPAERITVYEALN. . HPWLKE
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   246...250... ......260.........270.. ......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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