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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank117Aligned Residues257
% Identity23%Templatec2vrxB_
PDB info PDB header:cell cycle/transferaseChain: B: PDB Molecule:serine/threonine-protein kinase 12-a; PDBTitle: structure of aurora b kinase in complex with zm447439
Resolution1.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130..... ....140.........150.........160....... ..170.........180.........190.........200.
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Query Sequence  LINHDSIVANK. KLGEGAFGDVFIAELDQGGKQEVAVKTMRAEA. . TREARLRFMKEARLMRKYQHKHVVKLIGVAIHEH
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Template Sequence  EMPKRKFTIDDFDIGRPLGGNVYLAR. EKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK
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   82.......90.........100....... ..110.........120.........130.........140.........150.........160
 
   202.......210.........220... ......230.........240.........250.........260.........270.........280
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Query Sequence  PLMIVMEYCPNGSLLSHLKKNK. VSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISDFGMSDNKDEI
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Template Sequence  RIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL
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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   281........290.........300.........310.........320.........330.........340.........350.........360
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Query Sequence  KDETLEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKMPDGTHPTVADVV
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Template Sequence  RRRMCG. . TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLV. GMPPFDSPSHTETHRRIVNV. . DLKFPPFLSDGSKDLI
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   245....250 .........260.........270.........280... ......290.........300... ......310.........
 
   361........370.........380.........390
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Query Sequence  TGTCWQKNPEKRSTMDSIHKKLREFYESKK
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Template Sequence  . SKLLRYHPPQRLPLKGVME. . HPWVKANS
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   321........330......... 340.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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