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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank130Aligned Residues251
% Identity24%Templatec2vd5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:dmpk protein; PDBTitle: structure of human myotonic dystrophy protein kinase in2 complex with the bisindoylmaleide inhibitor bim viii
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140.........150.........160....... ..170.........180.........190.........200..
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Query Sequence  LINHDSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEA. . TREARLRFMKEARLMRKYQHKHVVKLIGVAIHEHP
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Template Sequence  RLQRDDFEILKVIGRGAFSEVAVVK. MKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENY
Template Known Secondary structure  S

GGG
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   65....70.........80......... 90.........100.........110.........120.........130.........140...
 
   203......210......... 220.........230.........240.........250.........260.........270.........280
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Query Sequence  LMIVMEYCPNGSLLSHL. . KKNKVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISDFGMSDNKDEI
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Template Sequence  LYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD
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   144.....150.........160.........170.........180.........190.........200.........210.........220...
 
   281........290........ .300.........310.........320.........330.........340.........350.
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Query Sequence  . . KDETLEKVPIKWLAPETM. . . . . . . QEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKMPDG
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Template Sequence  GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFY. GQTPFYADSTAETYGKIVHYKEHLSLPGV
Template Known Secondary structure  S

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   224.....230.........240.........250.........260.........270... ......280.........290.........300..
 
   352.......360.........370.. .......380
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Query Sequence  THPTVADVVTGTCWQKNPEKR. . . STMDSIHK
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Template Sequence  . PEEARDFI. QRLLC. PPETRLGRGGAGDFRT
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   307..310.... ..... 320.........330.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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