292 c2vagA_ Probab=100.00  E-value=2.3e-36  Score=215.62  Aligned_columns=258  Identities=21%

Q ss_pred             EEECHHHHHHHCCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCE------EEEEEECC
Q ss_conf             120001123211786778189999996899979999998711298999999999999984699848------37976144
Q batch____       125 LINHDSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEATREARLRFMKEARLMRKYQHKHV------VKLIGVAI  198 (390)
Q Consensus       125 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~VAiK~l~~~~~~~~~~~f~~E~~~l~~l~HpnI------v~~~g~~~  198 (390)
                      ++-.+.+++.++||+|+||.||+|+....+++.||||+++  ......+.+.+|+.+|++++|+|+      +.+.+...
T Consensus         9 ~~l~~~Y~i~~~LG~G~fG~V~~a~~~~~~~~~vAiK~i~--~~~~~~~~~~~Ei~il~~l~h~~~~~~~~~~~~~~~~~   86 (330)
T c2vagA_           9 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVK--NVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE   86 (330)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEC--SSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE
T ss_pred             CEECCCEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEEC--CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCC
T ss_conf             4867825999998762884899999976798399999983--99056899999999999843122233122200001233


Q ss_pred             CCCEEEEEEECCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECEEC
Q ss_conf             650599997478654432111--223330568898999999987420013443210165433443332332110000001
Q batch____       199 HEHPLMIVMEYCPNGSLLSHL--KKNKVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISDFGMSDN  276 (390)
Q Consensus       199 ~~~~~~iv~e~~~~g~l~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~~~~h~~l~~~n~~~~~~~~~kl~DfGls~~  276 (390)
                      ....+++.++++..+......  ...............++..++.++|...+.|+|+++.|++++.....++.+|+.+..
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~nil~~~~~~~~~~~~~~~~~  166 (330)
T c2vagA_          87 HHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNKRDERT  166 (330)
T ss_dssp             ETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEECCCEEEE
T ss_pred             CCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCCCCCC
T ss_conf             32000012211236752111222111013656555554455555431101222234554158985788620003454334


Q ss_pred             CCCCEEEEEEEEECC------------CCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf             477413200012013------------32088983697244444213799999999788999998898999999995799
Q batch____       277 KDEIKDETLEKVPIK------------WLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDY  344 (390)
Q Consensus       277 ~~~~~~~~~~~~~~~------------y~aPE~~~~~~~~~~sDvwS~G~~l~El~t~G~~Pf~~~~~~~~~~~i~~~~~  344 (390)
                      ...........+...            +.+|+......++.++|+|++|+++|++.+ ++.|+...+.......+.....
T Consensus       167 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~  245 (330)
T c2vagA_         167 LINPDIKVVDFGSATYDDEHHSTLVRHYRAPEVILALGWSQPCDVWSIGCILIEYYL-GFTVFPTHDSKEHLAMMERILG  245 (330)
T ss_dssp             ESCCCEEECCCSSCEETTSCCCSCCCCSCCHHHHTTSCCSTHHHHHHHHHHHHHHHH-SSCSCCCSCHHHHHHHHHHHHC
T ss_pred             CCCCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEEECCCC-CCCCCCCCCHHHHHHHHHHHCC
T ss_conf             444321000146633267542001210232100000111123542102258731004-8898875896899999985138


Q ss_pred             CCC------------------------------------------CCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHH
Q ss_conf             988------------------------------------------88678999999999986489966769889999999
Q batch____       345 RMK------------------------------------------MPDGTHPTVADVVTGTCWQKNPEKRSTMDSIHKKL  382 (390)
Q Consensus       345 ~~~------------------------------------------~p~~~~~~~~~~i~~~C~~~dP~~RPs~~~i~~~L  382 (390)
                      .++                                          .+...++++.++| .+||+.||++|||+.|+++  
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli-~~mL~~dP~~R~t~~elL~--  322 (330)
T c2vagA_         246 PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLI-QKMLEYDPAKRITLREALK--  322 (330)
T ss_dssp             SCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHH-HHHTCSSTTTSCCHHHHTT--
T ss_pred             CCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH-HHHCCCCHHHCCCHHHHHC--
T ss_conf             8998897442012123546566532100011100123331002356545899999999-9866588111776789967--


Q ss_pred             HHHHHC
Q ss_conf             998851
Q batch____       383 REFYES  388 (390)
Q Consensus       383 ~~~~~~  388 (390)
                      ..+|++
T Consensus       323 Hp~f~~  328 (330)
T c2vagA_         323 HPFFDL  328 (330)
T ss_dssp             SGGGGG
T ss_pred             CCCHHH
T ss_conf             911440


