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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank134Aligned Residues245
% Identity31%Templatec2qofA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ephrin receptor; PDBTitle: human epha3 kinase and juxtamembrane region, y596f mutant
Resolution1.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140.........150.. .......160.........170.........180.........190.........200..
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Query Sequence  LINHDSIVANKKLGEGAFGDVFIAELDQ. . GGKQEVAVKTMRAEATREARLRFMKEARLMRKYQHKHVVKLIGVAIHEHP
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Template Sequence  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP
Template Known Secondary structure  B

GGG
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   615....620.........630.........640.........650.........660.........670.........680.........690....
 
   203......210.........220..... ....230.........240.........250.........260.........270.........280
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Query Sequence  LMIVMEYCPNGSLLSHLKKNKVS. . LIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISDFGMSDNKDEI
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Template Sequence  VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFPIR. . . . . .
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   695....700.........710.........720.........730.........740.........750.........760........
 
   281........290.........300.........310.........320.........330.........340.........350.........360
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Query Sequence  KDETLEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKMPDGTHPTVADVV
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Template Sequence  . . . . . . . . . . . WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE. GYRLPPPMDCPAALYQLM
Template Known Secondary structure  ...........GS




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   790.........800.........810.........820.........830......... 840.........850.......
 
   361........370.........380........
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Query Sequence  TGTCWQKNPEKRSTMDSIHKKLREFYES
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Template Sequence  . LDCWQKDRNNRPKFEQIVSILDKLIRN
Template Known Secondary structure  .T
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   858.860.........870.........880....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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