Return to main results Retrieve Phyre Job Id

Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank285Aligned Residues239
% Identity21%Templatec2qkrA_
PDB info PDB header:transferaseChain: A: PDB Molecule:cdc2-like cdk2/cdc28 like protein kinase; PDBTitle: cryptosporidium parvum cyclin-dependent kinase cgd5_25102 with indirubin 3'-monoxime bound
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   130.........140.........150.........160.........170.........180.........190.........200.........
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  SIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEATREARLRFMKEARLMRKYQHKHVVKLIGVAIHEHPLMIVMEY
Query Conservation         

 
 

 

           



 
           
  
   
  
 




   
         

 
 
Alig confidence 




















...










.........



































Template Conservation     
 
 

 



 

    ... 
  



 
 .........    
  

  
 




             
    
Template Sequence  QGLMEKYLEKVGEGVVYKAKD. . . SQRIVALKRIS. . . . . . . . . TAIREISLLKELHHPNIVSLIDVIHSECLTLVFEFM
Template Known Secondary structure  B
SS
B


B





...




.........


TTB






Template Predicted Secondary structure 




...

.........


















Template SS confidence 















































































   17..20.........30....... ..40........ .50.........60.........70.........80....
 
   210.........220.........230.........240.........250.........260.........270.........280.........
Predicted Secondary structure 
















































Query SS confidence 















































































Query Sequence  CPNGSLLSHLKKNKVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISDFGMSDNKDEIKDETLEKVP
Query Conservation     
 
                    
   
  

     
  
   
         

 




               
Alig confidence 




















































.
























.
Template Conservation      
                         
                      .                         .
Template Sequence  EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINS. DALKLADFGLARAFGIPVRVVTLWY.
Template Known Secondary structure  S
TT


TT




GGG

.




TT
TTS






TT.
Template Predicted Secondary structure 
























.
















.
Template SS confidence 















































































   102.......110.........120.........130.........140.........150.... .....160.........170.........
 
   290.........300.........310.........320.........330.........340........
Predicted Secondary structure 































.....................
Query SS confidence 


























































. . . . . . . . . . . . . . . . . . . . .
Query Sequence  IKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKM. . . . . . . . . . . . . . . . . . . . .
Query Conservation    
 


          




 
  
 

 
 
  

           
         .....................
Alig confidence  ..





























.

























.....................
Template Conservation  ..                     
    
   .                
                              
Template Sequence  . . RAPDVLMGSKKYSTSVDIWSIGCIFAEMIT. GKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFE
Template Known Secondary structure  ..

TT




T.SS
S


SSGGG



TTT
TTGGGSS






Template Predicted Secondary structure  ..



















.



















Template SS confidence 















































































   186...190.........200.........210..... ....220.........230.........240.........250.........260..
 
   349350.........360.........370.........380........
Predicted Secondary structure  .......












Query SS confidence  . . . . . . .







































Query Sequence  . . . . . . . PDGTHPTVADVVTGTCWQKNPEKRSTMDSIHKKLREFYES
Query Conservation  .......
          
   
   

  


   
   
      
Alig confidence  .......











.


















..





Template Conservation             
    


.   
  

  


  


 ..

    
Template Sequence  KKPWSSIIPGFCQEGIDLL. SNMLCFDPNKRISARDAMN. . HPYFKD
Template Known Secondary structure  B

STT

.S
S
TTTS

T..SGGGTT
Template Predicted Secondary structure 





.







..


Template SS confidence 














































   263......270.........280. ........290.........300 ......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D