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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank116Aligned Residues239
% Identity21%Templatec2pziA_
PDB info PDB header:transferaseChain: A: PDB Molecule:probable serine/threonine-protein kinase pkng; PDBTitle: crystal structure of protein kinase pkng from mycobacterium2 tuberculosis in complex with tetrahydrobenzothiophene ax20017
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160.........170.........180.........190......... 200...
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Query Sequence  DSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEATREARLRFMKEARLMRKYQHKHVVKLIGVAIH. . . . . EHPL
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Template Sequence  GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG
Template Known Secondary structure  TTTTGGGTTS
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GGGGG


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   149150.........160.........170.........180.........190.........200.........210.........220........
 
   204.....210.........220.........230.........240.........250.........260.........270.........280...
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Query Sequence  MIVMEYCPNGSLLSHLKKNKVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISDFGMSDNKDEIKDE
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Template Sequence  YIVMEYVGGQSL. . . . . KQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQ. LKLIDLGAVSRINSF. . .
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   229230.........240 .........250.........260.........270.........280.... .....290.........
 
   284.....290.........300.........310.........320.........330.........340.........350.........360...
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Query Sequence  TLEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKMPDGTHPTVADVVTGT
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Template Sequence  GYLYGTPGFQAPEIVRTGP. TVATDIYTVGRTLAALTL. DLPTRNGRYVDGL. . . . . . . . PEDDPVLKTYDSYGRLL. RR
Template Known Secondary structure  S




TTTS
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   304.....310.........320.. .......330.........340 .........350... ......360.........370 ..
 
   364.....370.. .......380.......
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Query Sequence  CWQKNPEKR. STMDSIHKKLREFYE
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Template Sequence  AIDPDPRQRFTTAEEMSAQLTGVLR
Template Known Secondary structure  T
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   373......380.........390.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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