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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank233Aligned Residues247
% Identity17%Templatec2pmoX_
PDB info PDB header:transferaseChain: X: PDB Molecule:ser/thr protein kinase; PDBTitle: crystal structure of pfpk7 in complex with hymenialdisine
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160.........170. ........180.........190..
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Query Sequence  DSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEATREA. . . . . . . . . . . . . . . . RLRFMKEARLMRKYQHKHVVK
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Template Sequence  NDYRIIRTLNQGKFNKIILCEK. . . DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT
Template Known Secondary structure  TT
SS
...TTTT



SSSS

TT


SSB

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   26...30.........40....... ..50.........60.........70.........80.........90.........100..
 
   193......200.........210......... 220.........230.........240..... ....250.........260..
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Query Sequence  LIGVAIHEHPLMIVMEYCPNGSLLSHL. . . . . . . . . KKNKVSLIEKLRFTTEAADGIAYLER. SKCIHRDIAARNCLLSA
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Template Sequence  CEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDK
Template Known Secondary structure 
SSSS

TT
BSSSSSSS
SSS




TT

S


GGG
S
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   103......110.........120.........130.........140.........150.........160.........170.........180..
 
   263......270.........280.........290.........300 .........310.........320.........330.........340.
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Query Sequence  KNELKISDFGMSDNKDEIKDETLEKVPIKWLAPETMQE. KVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVV
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Template Sequence  NGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFY. NVVPFSLKISLVELFNNIR
Template Known Secondary structure  S




TT

BTT
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S
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   183......190.........200.........210.........220.........230.........240.. .......250.........260.
 
   342.... ...350.........360.........370.........380
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Query Sequence  NDYRM. . . . . . . . . . KMPDGTHPTVADVVTGTCWQKNPEKRSTMDSIHK
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Template Sequence  TKNIEYPLDRNHFLYPLTNFLSNEDIDFL. KLFLRKNPAERITSEDALK
Template Known Secondary structure  T






GGGTTSTTT




.S
SSTTTS

T
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   262.......270.........280.........290 .........300.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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