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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank204Aligned Residues226
% Identity21%Templatec2onlD_
PDB info PDB header:transferaseChain: D: PDB Molecule:map kinase-activated protein kinase 2; PDBTitle: crystal structure of the p38a-mapkap kinase 2 heterodimer
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   131........140. ........150.........160.........170.........180..... ....190......... 200....
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Query Sequence  IVANKKLGEGA. FGDVFIAELDQGGKQEVAVKTMRAEATREARLRFMKEARLMRKY. QHKHVVKLIGVAIH. . . . EHPLM
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Template Sequence  VKSGLQIKKNAIIDDVLQIF. NKRTQEKFALKMLQDC. . . . . . PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL
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B
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S......TT

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   48.50.........60....... ..70.........80... ......90.........100.........110.........120
 
   205....210.........220... ......230.........240.........250.........260.. .......270........
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Query Sequence  IVMEYCPNGSLLSHLKKNK. . . VSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSA. . . KNELKISDFGMSDNKD
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Template Sequence  IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT
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SS
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BTT




GGGSSSSTT




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   136...140.........150.........160.........170.........180.........190.........200.........210.....
 
   279280.........290.........300.........310.........320.........330.........340.........350........
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Query Sequence  EIKDETLEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKMPDGTHPTVAD
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Template Sequence  SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC. GYPPFYE. . . . . . . . . . . . . . FPNPEWSEVSEEVKM
Template Known Secondary structure  S





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   216...220.........230.........240.........250........ .260..... ....270.........280
 
   359360.........370.........
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Query Sequence  VVTGTCWQKNPEKRSTMDSIH
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Template Sequence  LI. RNLLKTEPTQRMTITEFM
Template Known Secondary structure  .TTT

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   301. .......310.........320
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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