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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank174Aligned Residues241
% Identity18%Templatec2j2iB_
PDB info PDB header:transferaseChain: B: PDB Molecule:proto-oncogene serine/threonine-protein kinase pim-1; PDBTitle: crystal structure of the humab pim1 in complex with2 ly333531
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160.........170 .........180...... ...190.........200.
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Query Sequence  DSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEATRE. . . . . ARLRFMKEARLMRKYQ. . HKHVVKLIGVAIHEH
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Template Sequence  SQYQVGPLLGSGGFGSVYSGI. RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD
Template Known Secondary structure  TT.TTTTGGG



TT


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   36...40.........50...... ...60.........70.........80.........90.........100.........110....
 
   202.......210......... 220.........230.........240.........250.........260. ........270........
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Query Sequence  PLMIVMEYCPNGSLLSHL. . KKNKVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLS. AKNELKISDFGMSDNKD
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Template Sequence  SFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK
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TT



SGGGTTTT


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   115....120.........130.........140.........150.........160.........170.........180.........190....
 
   279280.........290.........300.........310.........320.........330.........340.........350........
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Query Sequence  EIKDETLEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKMPDGTHPTVAD
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Template Sequence  DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC. GDIPFEHDEEII. . . . . . . . GGQVFFRQRVSSECQH
Template Known Secondary structure  SS
B



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   195....200.........210.........220.........230....... ..240......... 250.........260.....
 
   359360.........370.........380
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Query Sequence  VVTGTCWQKNPEKRSTMDSIHK
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Template Sequence  LI. RWCLALRPSDRPTFEEIQN
Template Known Secondary structure  .T
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T
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   266. ..270.........280......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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