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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank252Aligned Residues207
% Identity28%Templatec2hakH_
PDB info PDB header:signaling protein,transferaseChain: H: PDB Molecule:serine/threonine-protein kinase mark1; PDBTitle: catalytic and ubiqutin-associated domains of mark1/par-1
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160... ......170.........180.........190.........200.......
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Query Sequence  DSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTM. RAEATREARLRFMKEARLMRKYQHKHVVKLIGVAIHEHPLMIVM
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Template Sequence  GNYRLQKTIGKGNFAKVKLAR. HVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVM
Template Known Secondary structure  TT
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   51........60.........70. ........80.........90.........100.........110.........120.........
 
   208.210......... 220.........230.........240.........250.........260.........270.........280......
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Query Sequence  EYCPNGSLLSHL. KKNKVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISDFGMSDNKDEIKDETLE
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Template Sequence  EYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSN. . . . . . . . . . .
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   130.........140.........150.........160.........170.........180.........190........
 
   287..290.........300.........310.........320.........330.........340.........350.........360......
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Query Sequence  KVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKMPDGTHPTVADVVTGTCWQ
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Template Sequence  . . . . . . . . . . . . . EFTVGPEVDVWSLGVILYTLVS. GSLPF. . . . . . . . . . . . . . . . . . DRIPFYMSTDCENLL. KKLLV
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   199200.........210.........220 ..... ....230.........240 .....
 
   367..370.........380
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Query Sequence  KNPEKRSTMDSIHK
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Template Sequence  LNPIKRGSLEQIMK
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   287..290.........300
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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