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Job DescriptionQ22146
Confidence99.97%DateSat Apr 13 13:24:31 BST 2013
Rank312Aligned Residues196
% Identity20%Templatec2exeA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase clk3; PDBTitle: crystal structure of the phosphorylated clk3
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   177..180.........190.........200.........210.........220... ......230.........240.........250...
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Query Sequence  KEARLMRKYQHKHVVKLIGVAIHEHPLMIVMEYCPNGSLLSHLKKNK. . . VSLIEKLRFTTEAADGIAYLERSKCIHRDI
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Template Sequence  LEINVLKKIKEKFLCVL. . . . . . . . . MSDAFELL. GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDL
Template Known Secondary structure  T


B

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B


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BTTTT



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   200.........210...... ...220.... .....230.........240.........250.........260.........
 
   254.....260... ......270.........280.........290.........300.........310.........
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Query Sequence  AARNCLLSAK. . . . . . . . . . . . . . NELKISDFGMSDNKDEIKDETLEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEI
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Template Sequence  KPENILFVNSEFETLYNEEKSVKNTSIRVADFGSATFDHEH. . HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEY
Template Known Secondary structure 
GGG

B


B



GGG
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S
GGG

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ST
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   285....290.........300.........310.........320..... ....330.........340.........350.........360..
 
   320.........330.........340.. .......350.......
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Query Sequence  YSDGAEPYPGLTKIQTRAKIVVN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DYRMKMPDGTHPTVA
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Template Sequence  YR. GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLF
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SS




S
GGGTT


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GGGG
S

S
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   368. 370.........380.........390.........400.........410.........420.........430.........440......
 
   358.360.........370.........380........
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Query Sequence  DVVTGTCWQKNPEKRSTMDSIHKKLREFYES
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Template Sequence  DLM. RRMLEFDPAQRITLAEALL. . HPFFAG
Template Known Secondary structure  .T
S
TTTS

T..SGGGGG
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   447.. 450.........460........ .470....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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