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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank101Aligned Residues246
% Identity24%Templatec2cgvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk1; PDBTitle: identification of chemically diverse chk1 inhibitors by2 receptor-based virtual screening
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160.........170.........180.........190.........200........
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Query Sequence  DSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEATREARLRFMKEARLMRKYQHKHVVKLIGVAIHEHPLMIVME
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Template Sequence  EDWDLVQTLGEGAYGEVQLAV. NRVTEEAVAVKIVDMKRCPE. . . NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE
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   7..10.........20....... ..30.........40....... ..50.........60.........70.........80..
 
   209210......... 220.........230.........240.........250.........260.........270.... .....280....
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Query Sequence  YCPNGSLLSHL. KKNKVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISDFGMS. . . DNKDEIKDET
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Template Sequence  YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN
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TTGGGGSBTTTB

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SGGG
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   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   285....290.........300 .........310.........320.........330.........340.. .......350.........360..
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Query Sequence  LEKVPIKWLAPETMQE. KVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVN. DYRMKMPDGTHPTVADVVTG
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Template Sequence  KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA. GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL. H
Template Known Secondary structure  S

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   166...170.........180.........190.........200... ......210.........220.........230.........240.. .
 
   363......370.........380
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Query Sequence  TCWQKNPEKRSTMDSIHK
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Template Sequence  KILVENPSARITIPDIKK
Template Known Secondary structure  S
SSTTTS

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   244.....250.........260.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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