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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank28Aligned Residues253
% Identity21%Templatec2acxB_
PDB info PDB header:transferaseChain: B: PDB Molecule:g protein-coupled receptor kinase 6; PDBTitle: crystal structure of g protein coupled receptor kinase 6 bound to2 amppnp
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   124.....130.........140.........150.........160...... ...170.........180.........190.........200.
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Query Sequence  WLINHDSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAE. . ATREARLRFMKEARLMRKYQHKHVVKLIGVAIHEH
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Template Sequence  QPVTKNTFRQYRVLGKGGFGEVCACQ. VRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD
Template Known Secondary structure  S


GGGTT.TTT

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   179180.........190.........200.... .....210.........220.........230.........240.........250.......
 
   202.......210.........220... ......230.........240.........250.........260.........270.........280
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Query Sequence  PLMIVMEYCPNGSLLSHLKKNK. VSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISDFGMSDNKDEI
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Template Sequence  ALCLVLTLMNGGDLKFHIYHMAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG
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B





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SGGG
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   258.260.........270.........280.........290.........300.........310.........320.........330.......
 
   281........290.........300.........310.........320.........330.........340.........350.........360
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Query Sequence  KDETLEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKMPDGTHPTVADVV
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Template Sequence  QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA. GQSPFQQKIKREEVERLVK. EVPEEYSERFSPQARSLC
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   340.........350.........360.........370.........380 .........390......... 400.........410.......
 
   361........370.. .......380
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Query Sequence  TGTCWQKNPEKR. . . . . STMDSIHK
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Template Sequence  . SQLLCKDPAERLGCRGGSAREVKE
Template Known Secondary structure  .S
SSGGGSTTSSSSTT
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   421........430.........440....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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