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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank109Aligned Residues247
% Identity27%Templatec1xjdA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c, theta type; PDBTitle: crystal structure of pkc-theta complexed with staurosporine2 at 2a resolution
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160.........170. ........180.... .....190.........200.....
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Query Sequence  DSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEATREA. . RLRFMKEARLMRK. YQHKHVVKLIGVAIHEHPLMI
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Template Sequence  EDFILHKMLGKGSFGKVFLAE. FKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF
Template Known Secondary structure  TT
SSS.TTTTTT
TT
TTB


SS
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   378.380.........390........ .400.........410.........420.........430.........440.........450......
 
   206...210......... 220.........230.........240.........250.........260.........270.........280....
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Query Sequence  VMEYCPNGSLLSHL. KKNKVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISDFGMSDNKDEIKDET
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Template Sequence  VMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT
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TT
BSS

TT
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GGG
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TT
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TT

B
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   457..460.........470.........480.........490.........500.........510.........520.........530......
 
   285....290.........300.........310.........320.........330.........340.........350.........360....
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Query Sequence  LEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKMPDGTHPTVADVVTGTC
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Template Sequence  NFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI. GQSPFHGQDEEELFHSIRMD. . NPFYPRWLEKEAKDLL. VKL
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S
GGG

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   537..540.........550.........560.........570... ......580.........590... ......600......... 610..
 
   365....370..... ....380
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Query Sequence  WQKNPEKRSTM. DSIHK
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Template Sequence  FVREPEKRLGVRGDIRQ
Template Known Secondary structure  S
SSGGGSBTTBS
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   614.....620.........630
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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