Job Description Q22146 Confidence 100.00% Date Sat Apr 13 13:24:31 BST 2013 Rank 209 Aligned Residues 246 % Identity 21% Template c1ua2A_ PDB info PDB header:cell cycle, transferase Chain: A: PDB Molecule:cell division protein kinase 7; PDBTitle: crystal structure of human cdk7 Resolution 3.02 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	N	K	K	L	G	E	G	A	F	G	D	V	F	I	A	E	L	D	Q	G	G	K	Q	E	V	A	V	K	T	M	R	A	E	A	T	R	E	A	R	L	R	F	M	K	E	A	R	L	M	R	K	Y	Q	H	K	H	V	V	K	L	I	G	V	A	I	H	E	H	P	L	M	I	V	M	E	Y	C	P
Query Conservation
Alig confidence																				.															.	.	.	.	.	.	.	.
Template Conservation																				.															.	.	.	.	.	.	.	.
Template Sequence		E	K	L	D	F	L	G	E	G	Q	F	A	T	V	Y	K	A	R	.	D	K	N	T	N	Q	I	V	A	I	K	K	I	N	.	.	.	.	.	.	.	.	R	T	A	L	R	E	I	K	L	L	Q	E	L	S	H	P	N	I	I	G	L	L	D	A	F	G	H	K	S	N	I	S	L	V	F	D	F	M	E
Template Known Secondary structure											T	T								.		S	S			S									.	.	.	.	.	.	.	.	T															T	T	B										T	T										S
Template Predicted Secondary structure																				.															.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.									.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		212	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		N	G	S	L	L	S	H	L	.	K	K	N	K	V	S	L	I	E	K	L	R	F	T	T	E	A	A	D	G	I	A	Y	L	E	R	S	K	C	I	H	R	D	I	A	A	R	N	C	L	L	S	A	K	N	E	L	K	I	S	D	F	G	M	S	D	N	K	D	E	I	K	D	E	T	L	E	K	V	P	I
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		T	D	L	E	V	I	I	K	D	N	S	L	V	L	T	P	S	H	I	K	A	Y	M	L	M	T	L	Q	G	L	E	Y	L	H	Q	H	W	I	L	H	R	D	L	K	P	N	N	L	L	L	D	E	N	G	V	L	K	L	A	D	F	G	L	A	K	S	F	G	S	P	N	R	A	Y	H	Q	V	V	T	R
Template Known Secondary structure									T	T			S	S			S	S																			T	T								G	G	G					T	T									G	G	G	S	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		291	.	.	.	.	.	.	.	.	300		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure												.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	W	L	A	P	E	T	M	Q	E	.	K	V	Y	T	H	K	T	D	I	W	T	F	G	V	L	V	W	E	I	Y	S	D	G	A	E	P	Y	P	G	L	T	K	I	Q	T	R	A	K	I	V	V	N	D	Y	R	M	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																						.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.
Template Sequence		W	Y	R	A	P	E	L	L	F	G	A	R	M	Y	G	V	G	V	D	M	W	A	V	G	C	I	L	A	E	L	L	L	.	R	V	P	F	L	P	G	D	S	D	L	D	Q	L	T	R	I	F	E	T	L	G	T	P	T	E	E	Q	W	P	D	M	C	S	L	P	D	Y	V	T	F	K	S	F	P	G	I
Template Known Secondary structure		T	T							T	T		S																					.	S	S		S	S			S	S																	T	T	T	S	S	S	T	T	S	S	T	T
Template Predicted Secondary structure																																		.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
						348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	M	P	D	G	T	H	P	T	V	A	D	V	V	T	G	T	C	W	Q	K	N	P	E	K	R	S	T	M	D	S	I	H	K	K	L	R	E	F	Y	E	S	K	K
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.														.																				.	.
Template Conservation																			.																				.	.
Template Sequence		P	L	H	H	I	F	S	A	A	G	D	D	L	L	D	L	I	.	Q	G	L	F	L	F	N	P	C	A	R	I	T	A	T	Q	A	L	K	.	.	M	K	Y	F	S	N	R	P
Template Known Secondary structure								T	T										.						S	S	T	T	T	S								T	.	.	S	G	G	G	T	S	S	S
Template Predicted Secondary structure																			.																				.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D