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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank103Aligned Residues248
% Identity24%Templatec1mruB_
PDB info PDB header:transferaseChain: B: PDB Molecule:probable serine/threonine-protein kinase pknb; PDBTitle: intracellular ser/thr protein kinase domain of2 mycobacterium tuberculosis pknb.
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150.........160........ .170.........180.........190...... ...200.
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Query Sequence  HDSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEAT. . REARLRFMKEARLMRKYQHKHVVKLIGV. . . . AIHEH
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Template Sequence  SDRYELGEILGFGGMSEVHLAR. DLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP
Template Known Secondary structure  TTT
SS.TTTTSTTTTSSSST

BTTB


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   8.10.........20......... 30.........40.........50.........60.........70.........80......
 
   202.......210......... 220.........230.........240.........250.........260.........270.........280
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Query Sequence  PLMIVMEYCPNGSLLSHL. KKNKVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISDFGMSDNKDEI
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Template Sequence  LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR. . . . .
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   87..90.........100.........110.........120.........130.........140.........150.........160.
 
   281........290.........300.........310.........320.........330.........340....... ..350........
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Query Sequence  KDETLEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMK. . MPDGTHPTVAD
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Template Sequence  . . . . . . AITAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT. GEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDA
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   162.......170.........180.........190...... ...200.........210.........220.........230....
 
   359360.........370... ......380.........
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Query Sequence  VVTGTCWQKNPEKRS. TMDSIHKKLREFYESK
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Template Sequence  VV. LKALAKNPENRYQTAAEMRADLVRVHNGE
Template Known Secondary structure  .T
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   250. ........260.........270.........280
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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