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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank114Aligned Residues248
% Identity21%Templatec1kobB_
PDB info PDB header:kinaseChain: B: PDB Molecule:twitchin; PDBTitle: twitchin kinase fragment (aplysia), autoregulated protein2 kinase domain
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160.........170.........180.........190.........200........
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Query Sequence  DSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAEATREARLRFMKEARLMRKYQHKHVVKLIGVAIHEHPLMIVME
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Template Sequence  DYYDILEELGSGAFGVVHRCV. EKATGRVFVAKFI. NTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE
Template Known Secondary structure  GTTT.TTT

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   51........60.........70. ........80.... .....90.........100.........110.........120........
 
   209210.........220... ......230.........240.........250.........260. ........270.........280....
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Query Sequence  YCPNGSLLSHLKKNK. . VSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLS. . AKNELKISDFGMSDNKDEIKDET
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Template Sequence  FLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK
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BTT
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   129130.........140.........150.........160.........170.........180.........190.........200........
 
   285....290.........300.........310.........320.........330.........340.........350 .........360..
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Query Sequence  LEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKMPD. . GTHPTVADVVTG
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Template Sequence  VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS. GLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFI. K
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TTGGG

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   209210.........220.........230.........240..... ....250.........260.........270.........280..... .
 
   363......370.........380
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Query Sequence  TCWQKNPEKRSTMDSIHK
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Template Sequence  NLLQKEPRKRLTVHDALE
Template Known Secondary structure  TTS
SSGGGS

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   287..290.........300....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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