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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank287Aligned Residues242
% Identity26%Templatec1jnkA_
PDB info PDB header:transferaseChain: A: PDB Molecule:c-jun n-terminal kinase; PDBTitle: the c-jun n-terminal kinase (jnk3s) complexed with mgamp-pnp
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160... ......170.........180.........190.........200 .
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Query Sequence  DSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTM. RAEATREARLRFMKEARLMRKYQHKHVVKLIGVAIHE. . . . . . H
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Template Sequence  KRYQNLKPIGSGAQGIVCAAY. DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ
Template Known Secondary structure  TT
SS.TTTTSGGGS


TTB


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   62.......70.........80.. .......90.........100.........110.........120.........130.........140
 
   202.......210.........220.........230.........240.........250.........260.........270.........280.
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Query Sequence  PLMIVMEYCPNGSLLSHLKKNKVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISDFGMSDNKDEIK
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Template Sequence  DVYLVMELMDANLCQVIQM. . ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAS. . . . . F
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   141........150......... 160.........170.........180.........190.........200.........210.. .
 
   282.......290.........300.........310.........320.........330.........340.......
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Query Sequence  DETLEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMK. . . . . . . . . . . . . .
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Template Sequence  MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR. HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY
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   219220.........230.........240.........250........ .260.........270.........280.........290.......
 
   348.350.........360.........370.........380
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . MPDGTHPTVADVVTGTCWQKNPEKRSTMDSIHK
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Template Sequence  VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL. SKMLVIDPAKRISVDDALQ
Template Known Secondary structure  TS






S
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   298.300.........310.........320.........330...... ...340.........350.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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