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Job DescriptionQ22146
Confidence100.00%DateSat Apr 13 13:24:31 BST 2013
Rank280Aligned Residues247
% Identity23%Templatec1bl6A_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein (map kinase p38); PDBTitle: the complex structure of the map kinase p38/sb216995
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160...... ...170.........180.........190......... 200.
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Query Sequence  DSIVANKKLGEGAFGDVFIAELDQGGKQEVAVKTMRAE. ATREARLRFMKEARLMRKYQHKHVVKLIGVAIH. . . . . . EH
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Template Sequence  ERYQNLSPVGSGAYGSVCAAF. DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN
Template Known Secondary structure  TT



SS.TTT

SSTTSS


TTB


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   22.......30.........40.. .......50.........60.........70.........80.........90.........100
 
   202.......210.........220.........230.........240.........250.........260.........270.........280.
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Query Sequence  PLMIVMEYCPNGSLLSHLKKNKVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISDFGMSDNKDEIK
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Template Sequence  DVYLVTHLMGADLNNI. VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM
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.TS


TT






GGG
TT




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   101........110...... ...120.........130.........140.........150.........160.........170.........
 
   282.......290.........300.........310.........320.........330.........340........
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Query Sequence  DETLEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKM. . . . . . . . . . . . .
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Template Sequence  TGYVATRWY. RAPEIMLNWMHYNQTVDIWSVGCIMAELLT. GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN
Template Known Secondary structure  SSS
T.S
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   180........ .190.........200.........210........ .220.........230.........240.........250.......
 
   349350.........360.........370.........380
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Query Sequence  . . . . . . . . . . . . . . . . PDGTHPTVADVVTGTCWQKNPEKRSTMDSIHK
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Template Sequence  YIQSLTQMPKMNFANVFIGANPLAVDLL. EKMLVLDSDKRITAAQALA
Template Known Secondary structure  TTS






GGGTSTT

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   258.260.........270.........280..... ....290.........300....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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