Job Description Q9XUS7 Confidence 37.27% Date Fri May 3 21:43:12 BST 2013 Rank 320 Aligned Residues 314 % Identity 7% Template c3vkhA_ PDB info PDB header:motor protein Chain: A: PDB Molecule:dynein heavy chain, cytoplasmic; PDBTitle: x-ray structure of a functional full-length dynein motor domain Resolution 3.80 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.								.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.
Query Sequence		S	F	N	S	F	L	Q	Q	L	D	Q	I	A	T	R	H	Q	T	S	A	E	H	I	R	G	G	V	.	.	.	.	.	.	.	V	S	Y	V	A	S	K	T	C	Q	M	R	S	S	R	K	N	A	I	N	D	L	K	T	I	N	D	K	L	E	D	Q	I	N	E	M	C	K	S	G	K	C	Y	L	K	S
Query Conservation																													.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	R	D	A	V	V	S	S	L	V	Y	I	H	Q	T	I	G	E	A	N	I	R	L	L	K	R	Q	G	R	Q	N	Y	V	T	P	R	H	Y	L	D	F	I	N	Q	V	V	L	L	I	N	E	K	R	D	Q	L	E	E	E	Q	L	H	L	N	I	G	L	K	K	L	R	D	T	E	A	Q	V	K	D	L
Template Known Secondary structure																												S	S
Template Predicted Secondary structure
Template SS confidence
		3223	.	.	.	.	.	.	3230	.	.	.	.	.	.	.	.	.	3240	.	.	.	.	.	.	.	.	.	3250	.	.	.	.	.	.	.	.	.	3260	.	.	.	.	.	.	.	.	.	3270	.	.	.	.	.	.	.	.	.	3280	.	.	.	.	.	.	.	.	.	3290	.	.	.	.	.	.	.	.	.	3300	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210							.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																																																	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.
Query Sequence		F	K	D	A	E	N	S	Y	Q	K	F	Y	K	A	D	K	N	L	E	I	S	R	L	E	L	E	K	A	R	A	L	A	N	A	R	N	E	A	C	E	L	A	K	Q	D	Y	S	A	L	V	R	K	T	N	A	E	Q	K	R	Y	H	V	E	.	.	.	.	.	.	L	L	P	V	I	F	A	R	L	K	A
Query Conservation																																																																	.	.	.	.	.	.
Alig confidence																																																																	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	V	S	L	A	Q	K	N	R	E	L	D	V	K	N	E	Q	A	N	Q	K	L	K	Q	M	V	Q	D	Q	Q	A	A	E	I	K	Q	K	D	A	R	E	L	Q	V	Q	L	D	V	R	N	K	E	I	A	V	Q	K	V	K	A	Y	A	D	L	E	K	A	E	P	A	I	I	E	A	Q	E	A	V	S	T
Template Known Secondary structure																					T													T					T	S	G	G	G	G	G	T	T	T						T											G	G	G	T	S	T											S
Template Predicted Secondary structure
Template SS confidence
		3303	.	.	.	.	.	.	3310	.	.	.	.	.	.	.	.	.	3320	.	.	.	.	.	.	.	.	.	3330	.	.	.	.	.	.	.	.	.	3340	.	.	.	.	.	.	.	.	.	3350	.	.	.	.	.	.	.	.	.	3360	.	.	.	.	.	.	.	.	.	3370	.	.	.	.	.	.	.	.	.	3380	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.				.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		V	D	K	E	C	I	A	D	M	R	Q	V	L	.	.	.	Q	K	I	V	S	F	D	D	S	L	A	D	S	T	E	E	C	R	K	I	M	Q	R	E	V	G	K	I	D	A	E	G	D	A	Q	L	V	L	K	S	V	E	A	T	I	E	Q	P	A	P	F	E	I	E	D	L	G	D	P	K	N	C	D	S
Query Conservation															.	.	.
Alig confidence															.	.	.
Template Conservation
Template Sequence		I	K	K	K	H	L	D	E	I	K	S	L	P	K	P	P	T	P	V	K	L	A	M	E	A	V	C	L	M	L	G	G	K	K	L	E	W	A	D	I	R	K	K	I	M	E	P	N	F	I	T	S	I	I	N	Y	D	T	K	K	M	M	T	P	K	I	R	E	A	I	T	K	G	Y	L	E	D	P	G	F
Template Known Secondary structure														S	S																T	T												G	G	G		T	T							T			T	T				T	T	T									T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		3383	.	.	.	.	.	.	3390	.	.	.	.	.	.	.	.	.	3400	.	.	.	.	.	.	.	.	.	3410	.	.	.	.	.	.	.	.	.	3420	.	.	.	.	.	.	.	.	.	3430	.	.	.	.	.	.	.	.	.	3440	.	.	.	.	.	.	.	.	.	3450	.	.	.	.	.	.	.	.	.	3460	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	N	D	S	A	D	G	S	G	G	K	L	L	K	S	S	P	S	K	N	R	I	I	R	N	F	L	G	I	L	K	E	K	E	A	D	E	K	P	E	A	S	N	N	D	Q	L	M	Y	T	D	K	S	K	P	A	H	V	R	L	S	C	L	R	S	K	I	R	D	M	E	K	Q	L	E	Q	A	I	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Y	E	T	V	N	R	A	S	K	A	C	G	P	L	V	K	W	A	T	A	Q	T	Y	Y	S	E	I	L	K	L	K	Q	D	E	I	V	A	T	I	T	A	L	E	K	S	I	A	T	Y	K	E	E	Y	A	T	L	I	R	E	T	E	Q	I	K	T	E	S	S	K	V	K	N	K	V	D	R	S	I	A
Template Known Secondary structure											T	T																T	T				S	G	G	G																T	T	S
Template Predicted Secondary structure
Template SS confidence
		3463	.	.	.	.	.	.	3470	.	.	.	.	.	.	.	.	.	3480	.	.	.	.	.	.	.	.	.	3490	.	.	.	.	.	.	.	.	.	3500	.	.	.	.	.	.	.	.	.	3510	.	.	.	.	.	.	.	.	.	3520	.	.	.	.	.	.	.	.	.	3530	.	.	.	.	.	.	.	.	.	3540	.	.
		379	380	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	E	G	I	T	R	L	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	D	N	L	N	S	E	R	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		3563	.	.	.	.	.	.	3570	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D