Job Description Q9XUS7 Confidence 27.08% Date Fri May 3 21:43:12 BST 2013 Rank 343 Aligned Residues 232 % Identity 9% Template c3vkgB_ PDB info PDB header:motor protein Chain: B: PDB Molecule:dynein heavy chain, cytoplasmic; PDBTitle: x-ray structure of an mtbd truncation mutant of dynein motor domain Resolution 2.81 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.													.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.								.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Query Sequence		T	K	L	R	S	L	A	K	K	Y	A	K	K	S	E	E	D	D	E	I	L	K	S	V	S	Y	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	F	N	S	F	L	Q	Q	L	D	Q	I	A	T	R	H	Q	T	S	A	E	H	I	R	G	G	V	.	.	.	.	.	.	.	V	S	Y	V	A	S
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	L	F	Q	V	G	S	E	F	T	R	N	L	D	L	E	N	P	Q	Y	I	A	P	P	V	F	I	Q	E	A	E	I	M	M	A	I	P	P	S	H	R	D	A	V	V	S	S	L	V	Y	I	H	Q	T	I	G	E	A	N	I	R	L	L	K	R	Q	G	R	Q	N	Y	V	T	P	R	H	Y	L	D
Template Known Secondary structure											T	T	T	T	S					T	T																	S	S
Template Predicted Secondary structure
Template SS confidence
		3179	3180	.	.	.	.	.	.	.	.	.	3190	.	.	.	.	.	.	.	.	.	3200	.	.	.	.	.	.	.	.	.	3210	.	.	.	.	.	.	.	.	.	3220	.	.	.	.	.	.	.	.	.	3230	.	.	.	.	.	.	.	.	.	3240	.	.	.	.	.	.	.	.	.	3250	.	.	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	C	Q	M	R	S	S	R	K	N	A	I	N	D	L	K	T	I	N	D	K	L	E	D	Q	I	N	E	M	C	K	S	G	K	C	Y	L	K	S	F	K	D	A	E	N	S	Y	Q	K	F	Y	K	A	D	K	N	L	E	I	S	R	L	E	L	E	K	A	R	A	L	A	N	A	R	N	E	A	C	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	N	Q	V	V	L	L	I	N	E	K	R	D	Q	L	E	E	E	Q	L	H	L	N	I	G	L	K	K	L	R	D	T	E	A	Q	V	K	D	L	Q	V	S	L	A	Q	K	N	R	E	L	D	V	K	N	E	Q	A	N	Q	K	L	K	Q	M	V	Q	D	Q	Q	A	A	E	I	K	Q	K	D	A	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		3263	.	.	.	.	.	.	3270	.	.	.	.	.	.	.	.	.	3280	.	.	.	.	.	.	.	.	.	3290	.	.	.	.	.	.	.	.	.	3300	.	.	.	.	.	.	.	.	.	3310	.	.	.	.	.	.	.	.	.	3320	.	.	.	.	.	.	.	.	.	3330	.	.	.	.	.	.	.	.	.	3340	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	K	Q	D	Y	S	A	L	V	R	K	T	N	A	E	Q	K	R	Y	H	V	E	L	L	P	V	I	F	A	R	L	K	A	V	D	K	E	C	I	A	D	M	R	Q	V	L	Q	K	I	V	S	F	D	D	S	L	A	D	S	T	E	E	C	R	K	I	M	Q	R	E	V	G	K	I	D	A	E	G	D
Query Conservation
Alig confidence																					.	.	.
Template Conservation																					.	.	.
Template Sequence		E	L	Q	V	Q	L	D	V	R	N	K	E	I	A	V	Q	E	Q	L	.	.	.	E	N	A	A	N	E	L	K	L	K	Q	D	E	I	V	A	T	I	T	A	L	E	K	S	I	A	T	Y	K	E	E	Y	A	T	L	I	R	E	T	E	Q	I	K	T	E	S	S	K	V	K	N	K	V	D	R	S	I	A
Template Known Secondary structure															T	T				T	.	.	.	T	T	T
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		3343	.	.	.	.	.	.	3350	.	.	.	.	.	.	.	.	.	3360	.				.	.	.	.	.	.	.	.	3370	.	.	.	.	.	.	.	.	.	3380	.	.	.	.	.	.	.	.	.	3390	.	.	.	.	.	.	.	.	.	3400	.	.	.	.	.	.	.	.	.	3410	.	.	.	.	.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	L	V	L	K	S	V	E	A	T	I	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	D	N	L	N	S	E	R	G	R	W	E	Q
Template Known Secondary structure															T
Template Predicted Secondary structure
Template SS confidence
		3563	.	.	.	.	.	.	3570	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D