Job Description Q9XUS7 Confidence 99.30% Date Fri May 3 21:43:12 BST 2013 Rank 213 Aligned Residues 53 % Identity 26% Template c3rebD_ PDB info PDB header:protein binding Chain: D: PDB Molecule:tyrosine-protein kinase hck; PDBTitle: hiv-1 nef protein in complex with engineered hck-sh3 domain Resolution 3.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	T	A	L	F	E	F	A	K	S	S	A	E	T	M	S	I	E	Q	G	E	I	L	L	V	L	E	H	D	H	G	D	G	W	T	R	T	K	N	C	R	K	H	N	E	E	S	G	F	V	P	T	S	Y	L	Q
Query Conservation
Alig confidence																																	.						.	.	.
Template Conservation																																	.						.	.	.
Template Sequence		I	V	V	A	L	Y	D	Y	V	S	W	S	P	D	D	L	S	F	Q	K	G	D	Q	M	V	V	L	E	E	S	G	.	E	W	W	K	A	.	.	.	R	S	L	A	T	R	K	E	G	Y	I	P	S	N	Y	V	A
Template Known Secondary structure						S	S		B			S	S	T	T	B			B		T	T									S	S	.	S					.	.	.			T	T	T								G	G	G
Template Predicted Secondary structure																																	.						.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D