Job Description Q9XUS7 Confidence 95.04% Date Fri May 3 21:43:12 BST 2013 Rank 248 Aligned Residues 237 % Identity 10% Template c2q13A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:dcc-interacting protein 13 alpha; PDBTitle: crystal structure of bar-ph domain of appl1 Resolution 2.05 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	F	F	T	V	Q	D	P	S	N	A	L	L	S	Y	T	Q	K	G	I	D	F	F	E	K	L	G	Q	F	S	K	E	K	A	A	I	E	E	E	Y	S	T	K	L	R	S	L	A	K	K	Y	A	K	K	S	E	E	D	D	E	I	L	K	S	V	S	Y	T	S	S	F	N	S	F	L	Q	Q	L	D
Query Conservation
Alig confidence									.	.																																															.	.
Template Conservation									.	.																																															.	.
Template Sequence		S	P	Q	T	R	S	L	.	.	L	G	V	F	E	E	D	A	T	A	I	S	N	Y	M	N	Q	L	Y	Q	A	M	H	R	I	Y	D	A	Q	N	E	L	S	A	A	T	H	L	T	S	K	L	L	K	E	Y	.	.	E	K	Q	R	F	P	L	D	E	V	M	S	S	T	L	Q	Q	F	S	K	V	I	D
Template Known Secondary structure									.	.																																													T	T	.	.	T	T	S
Template Predicted Secondary structure									.	.																																															.	.
Template SS confidence
		16	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	A	T	R	H	Q	T	S	A	E	H	I	R	G	G	V	V	S	Y	V	A	S	K	T	C	Q	M	R	S	S	R	K	N	A	I	N	D	L	K	T	I	N	D	K	L	E	D	Q	I	N	E	M	C	K	S	G	K	C	Y	L	K	S	F	K	D	A	E	N	S	Y	Q	K	F	Y	K	A	D	K	N
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	S	S	C	H	A	V	L	S	T	Q	L	A	D	A	M	M	F	P	I	T	Q	F	K	E	R	D	L	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	T	L	K	E	V	F	Q	I	A	S	N	D	H	D	A	A	I	N	R	Y	S	R	L	S	K	K
Template Known Secondary structure																		T										T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								T			S	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.																						.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																											.	.	.	.
Query SS confidence																																											.	.	.	.
Query Sequence		L	E	I	S	R	L	E	L	E	K	A	R	A	L	A	N	A	R	N	E	A	C	E	L	A	K	Q	D	Y	S	A	L	V	R	K	T	N	A	E	Q	K	.	.	.	.	R	Y	H	V	E	L	L	P	V	I	F	A	R	L	K	A	V	D	K	E	C	I	A	D	M	R	Q	V	L	Q	K	I	V	S	F
Query Conservation																																											.	.	.	.
Alig confidence		.																																									.	.	.	.
Template Conservation		.
Template Sequence		.	R	E	N	D	K	V	K	Y	E	V	T	E	D	V	Y	T	S	R	K	K	Q	H	Q	T	M	M	H	Y	F	C	A	L	N	T	L	Q	Y	K	K	K	I	A	L	L	E	P	L	L	G	Y	M	Q	A	Q	I	S	F	F	K	M	G	S	E	N	L	N	E	Q	L	E	E	F	L	A	N	I	G	T	S
Template Known Secondary structure		.	S																																																																S
Template Predicted Secondary structure		.
Template SS confidence
			154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	S	L	A	D	S	T	E	E	C	R	K	I	M	Q	R	E	V	G	K	I	D	A	E	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q	N	V	R	R	E	M	D	S	D	I	E	T	M	Q	Q	T	I	E	D	L	E	V	A	S	D
Template Known Secondary structure																												G
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D