 |
| Job Description | Q9XUS7 | | Confidence | 99.36% | Date | Fri May 3 21:43:12 BST 2013 |
| Rank | 174 | Aligned Residues | 82 |
| % Identity | 18% | Template | c1ov3A_ |
| PDB info |
PDB header:oxidoreductase activator | Chain: A: PDB Molecule:neutrophil cytosol factor 1; |
PDBTitle: structure of the p22phox-p47phox complex
|
| Resolution | 1.80 Å |
|
 |
|   |   |
521 | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
S | S | P | K | I | L | R | S | S | F | S | G | A | I | R | K | S | L | S | T | P | D | S | V | K | V | E | T | A | V | T | V | T | A | L | F | E | F | A | K | S | S | A | E | T | M | S | I | E | Q | G | E | I | L | L | V | L | E | H | D | H | G | D | G | W | T | R | T | K | N | C | R | K | H | N | E | E | S | G | F |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |   |
|
|
|
|   |   |
|
|   |
|   |
|   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |
|
|   | . | . | . | . | . |   |   |   |   |   |
|   |   |
|   |
| Template Sequence |   |
A | K | R | G | W | I | P | A | S | F | L | E | P | L | D | S | P | D | E | T | E | D | P | E | P | N | Y | A | G | E | P | Y | V | A | I | K | A | Y | T | A | V | E | G | D | E | V | S | L | L | E | G | E | A | V | E | V | I | H | K | L | L | D | G | W | W | . |
. |
. |
. |
. |
V | I | R | K | D | D | V | T | G | Y |
| Template Known Secondary structure |   |
|
|
|
|
|
|
| G | G | G |
|
|
| S | S |
| T | T | S |
|
| S |
|
|
|
| T | T |
|  |  |  |  |  | S | S |
| B |
|
|
| S | T | T | B |
|
| B |
| T | T |
|  |  |  |  |  |  |
|
| T | T | S |  |  | . | . | . | . | . |  |  |  |  | T | T |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  | . | . | . | . | . |  |  |  |  |
|
|  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 270 | . | . | . | . |
|   |
|   |   |
601 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |
|
|
|  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
| Query Sequence |   |
V | P | T | S | Y | L | Q |
| Query Conservation |   |
  |
|   |
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
| Template Conservation |   |
|
|   |   |
|
|
|
| Template Sequence |   |
F | P | S | M | Y | L | Q |
| Template Known Secondary structure |   |
 |  | G | G | G |  |  |
| Template Predicted Secondary structure |   |
 |  |
|
|  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|   |   |
275 | . | . | . | . | 280 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|