 |
| Job Description | Q9XXE5 | | Confidence | 45.86% | Date | Sat Apr 13 12:56:17 BST 2013 |
| Rank | 423 | Aligned Residues | 107 |
| % Identity | 11% | Template | c3mesB_ |
| PDB info |
PDB header:transferase | Chain: B: PDB Molecule:choline kinase; |
PDBTitle: crystal structure of choline kinase from cryptosporidium2 parvum iowa ii, cgd3_2030
|
| Resolution | 2.35 Å |
|
 |
|   |   |
121 | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | |
. | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | D | H | D | N | I | E | P | L | K | K | L | G | E | G | A | F | G | E | V | M | M | G | T | M | K | F | R | K | G | G | K | S | V | Q | V | A | I | K | Q | A | K | L | S | N | L | T | K | E | Q | I | K | E | F | M | G | E | A | R | V | M | R | S | L | . |
S | H | P | H | V | V | R | F | Y | G | V | P | R | R | R |
| Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   | . |   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| Template Conservation |   |
  |   |   |   |   |
|   | . |
|   |   |
|   |
|
|   |
|
|   |   |
|   |
|   |   |   | . | . |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |   |
|   | . | . | . | . | . |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |
|   |   |   |   |   |   | . |
| Template Sequence |   |
I | N | E | S | Y | I | E | . |
V | K | Q | I | F | S | G | L | T | N | Q | L | F | V | V | S | I | V | . |
. |
N | E | L | K | H | P | R | I | L | F | R | I | Y | G | K | H | V | F | Y | D | . |
. |
. |
. |
. |
S | K | V | E | L | D | V | F | R | Y | L | S | N | I | N | I | A | P | N | I | I | A | D | F | P | E | . |
| Template Known Secondary structure |   |
|
| G | G | G |  |  | . |  |  |  |  |
|
|
| S | S | S |  |  |  |  |  |  |  |
| . | . |
|
|
|
|
| S |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|
|  |  |  |  |  | T | T | . |
| Template Predicted Secondary structure |   |
|
|
|
|
|  |  | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
| . |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
68 | . | 70 | . | . | . | . | |
. | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
|
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | |
|   |
|   |   |
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | |
. | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
V | N | V | A | L | C | R | S | L | N | E | F | L | A | K | C | H | R | K | L | R | C | A | T | P | F | . |
F | V | C | M | S | V | N | W | L | S | V | L | N | E | L | R | V |
| Query Conservation |   |
  |   |   |   |   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |
|   |
|
|   |
|
|
|   |   |   |
|
| Alig confidence |   |
. | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
. | . | . | . | . | . |   |   |
|   |
|   |
|   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|   |   |   |   |
| Template Sequence |   |
. |
. |
. |
. |
. |
. |
G | R | I | E | E | F | I | D | G | E | P | L | T | T | K | Q | L | Q | L | T | H | I | C | V | E | V | A | K | N | M | G | S | L | H | I | I | N | S |
| Template Known Secondary structure |   |
. | . | . | . | . | . |  |  |  |  |  |
|
|
| S |  |  |
|
| T | T | G | G | G | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | T |
| Template Predicted Secondary structure |   |
. | . | . | . | . | . |
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|
|
|
146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|