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Job DescriptionQ9XXE5
Confidence99.76%DateSat Apr 13 12:56:17 BST 2013
Rank178Aligned Residues115
% Identity19%Templatec3h4jB_
PDB info PDB header:transferaseChain: B: PDB Molecule:snf1-like protein kinase ssp2; PDBTitle: crystal structure of pombe ampk kdaid fragment
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   124.....130.........140.........150.........160...... ...170.........180.........190.........200..
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Query Sequence  DNIEPLKKLGEGAFGEVMMGTMKFRKGGKSVQVAIKQAKLSNL. TKEQIKEFMGEARVMRSLSHPHVVRFYGVPRRRVNV
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Template Sequence  GPYIIRETLGEGSFGKVKLATHY. . . . KTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDI
Template Known Secondary structure  TTTTT....TT

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   32.......40.........50.... .....60.........70.........80.........90.........100.......
 
   203.. ....210.........220.........230.........240..
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Query Sequence  ALC. . . . . RSLNEFLAKCHRKLRCATPFFVCMSVNWLSVLNELRV
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Template Sequence  VMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKI
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   108.110.........120.........130.........140.........150..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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