Job Description Q9XXE5 Confidence 99.19% Date Sat Apr 13 12:56:17 BST 2013 Rank 392 Aligned Residues 82 % Identity 21% Template c3gxxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b Resolution 2.40 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.					80	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.																																														.	.	.	.
Query SS confidence																						.	.																																														.	.	.	.
Query Sequence		K	E	P	Y	Y	H	G	F	L	P	R	E	D	V	K	T	V	L	K	N	.	.	N	G	D	F	V	I	R	I	S	E	P	Q	A	G	S	P	R	S	N	I	L	S	V	M	H	C	V	P	P	M	E	E	E	I	K	H	Y	V	I	K	T	K	G	D	K	.	.	.	.	I	F	I	E	K	V	S	F	L
Query Conservation																						.	.																																														.	.	.	.
Alig confidence								.														.	.															.	.	.										.	.	.	.																.	.	.	.
Template Conservation								.																														.	.	.										.	.	.	.
Template Sequence		N	H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	.	.	.	H	L	A	I	T	W	K	L	D	.	.	.	.	K	D	L	F	Q	H	V	D	I	Q	E	X	E	K	E	X	G	K	V	L	V	V	E	G	Q	R	Y	H
Template Known Secondary structure		T		T	T	B		.												T	T	S		T	T									S	T	T		.	.	.										.	.	.	.	T	T																				S	S	S				S
Template Predicted Secondary structure								.																														.	.	.										.	.	.	.
Template SS confidence
		9	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.				.	.	.	.	.	.	50	.	.					.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	P	E	M	V	E	W	H	L	T	K	K	E	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	D	Q	I	I	V	E	Y	L	Q	N	K	I	R	L
Template Known Secondary structure		S															T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D