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Job DescriptionQ22245
Confidence100.00%DateSun Jun 30 11:14:08 BST 2013
Rank102Aligned Residues297
% Identity19%Templated1koaa2
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution3.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150.........160.........170.........180.......
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Query Sequence  DQITIHKKLGEGAFGEVSSGVMKFKKGMKTVQVAIKQVKLDKTGKAKIKDFLAEARTMRK
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Template Sequence  DHYDIHEELGTGAFGVVHRVT. . . . ERATGNNFAAKFVMTP. . HESDKETVRKEIQTMSV
Template Known Secondary structure  GTTT....TTTT


..S
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   5940.........5950.........5960 .........5970...... ...5980.........5990...
 
   188.190.........200.........210.........220...... ...230.........240......
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Query Sequence  LGHQNIIKFYGVGVLQEPLYLVMELAVNGALDSFLKKNE. DLSVDKKTEMILQAAWGLEY
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Template Sequence  LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCH
Template Known Secondary structure  T

TTB

TT



S
BT
TTS
B
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   5994.....6000.........6010.........6020.........6030.........6040.........6050...
 
   247..250.........260.... .....270.........280.........290.........300...
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Query Sequence  IHGKPMLHRDIAARNCLY. . . TDGKVKISDFGLTRNGTVYQIKPNTKSPIRWLAIETIKT
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Template Sequence  MHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEG
Template Known Secondary structure  TT




GGGSSTTS




TT


TTS

S
TTT

T
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   6054.....6060.........6070.........6080.........6090.........6100.........6110...
 
   304.....310.........320.........330.........340....... ..350.........360
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Query Sequence  MICSEKTDVWAYGVLCWEIFNNAAEPYPGMKPADVATQVANGYR. . . MPPYPHAQAEIQT
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Template Sequence  KPVGYYTDMWSVGVLSYILLS. GLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD
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B
.SS
SS

SST


S

GGGGG

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   6114.....6120.........6130.... .....6140.........6150.........6160.........6170..
 
   361........370.........380.. .......390.........400.........410.....
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Query Sequence  MMARCNAENPNDRPSMAEIAEI. . . . . LQRVTETPRPNFTAIAKKEAEELLLMNSVTTKT
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Template Sequence  FIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIKTKYDAWPEPL
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SSGGGS

STTTS
TT

S



B
TTTTTTS


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   6173......6180.........6190.........6200.........6210.........6220.........6230..
 
   416...420.........430.
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Query Sequence  TARRKKSNVKLPKGMS
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Template Conservation                  
Template Sequence  PPLGRISNYSSLRKHR
Template Known Secondary structure  SGGGGGGG

GGGGG
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   6233......6240........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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