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Job DescriptionQ22245
Confidence100.00%DateSun Jun 30 11:14:08 BST 2013
Rank101Aligned Residues255
% Identity34%Templatec4hzsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:activated cdc42 kinase 1; PDBTitle: crystal structure of ack1 kinase domain with c-terminal sh3 domain
Resolution3.23 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140.........150.........160.........170 .........180...
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Query Sequence  LEHDQITIHKKLGEGAFGEVSSGVMKFKKGMKTVQVAIKQVKLDKT. GKAKIKDFLAEAR
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Template Sequence  IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKT. VSVAVKCLKPDVLSQPEAMDDFIREVN
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GGG



B

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   121........130.........140.........150.. .......160.........170.........
 
   184.....190.........200.........210.........220.. .......230.........240..
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Query Sequence  TMRKLGHQNIIKFYGVGVLQEPLYLVMELAVNGALDSFL. KKNEDLSVDKKTEMILQAAW
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Template Sequence  AMHSLDHRNLIRLYGVVLTPPM. KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE
Template Known Secondary structure  T


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   180.........190.........200. ........210.........220.........230........
 
   243......250.........260.. .......270.........280.........290.........300.
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Query Sequence  GLEYIHGKPMLHRDIAARNC. LYTDGKVKISDFGLTRNGTVYQIKPNTKSPIRWLAIETI
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Template Sequence  GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM. . . . . . . . . RALPVPFAWCAPESL
Template Known Secondary structure  TT


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SGGGSSSS


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   239240.........250.........260.........270.... .....280.........
 
   302.......310.........320.........330.........340.... .....350.........360
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Query Sequence  KTMICSEKTDVWAYGVLCWEIFNNAAEPYPGMKPADVATQVAN. GYRMPPYPHAQAEIQT
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Template Sequence  KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYN
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TTT

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   303......310.........320.........330.........340.........350.........360..
 
   361........370.........380.........390
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Query Sequence  MMARCNAENPNDRPSMAEIAEILQRVTETP
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Template Sequence  VMVQCWAHKPEDRPTFVALRDFLLEAQPTD
Template Known Secondary structure  T
SSGGGS

T


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   363......370.........380.........390..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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