Return to main results Retrieve Phyre Job Id

Job DescriptionQ22245
Confidence99.93%DateSun Jun 30 11:14:08 BST 2013
Rank319Aligned Residues219
% Identity16%Templatec4gygA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rio2 kinase; PDBTitle: crystal structure of the rio2 kinase from chaetomium thermophilum
Resolution2.48 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   130.........140.........150.........160..... ....170.........
Predicted Secondary structure 














..........





Query SS confidence 



































. . . . . . . . . .













Query Sequence  ITIHKKLGEGAFGEVSSGVMKFKKGMKTVQVAIKQV. . . . . . . . . . KLDKTGKAKIKDFL
Query Conservation        

 
 

 

              



  ..........            
 
Alig confidence 


















.....











..........













Template Conservation 
 
   

 
  
 

   .....   
  



  
                       
Template Sequence  YSVGSRIGVGKESDIMIVA. . . . . DEKGKQKVLKIHRLGRISFRTVKRDYLRNRSTGSWM
Template Known Secondary structure  S
SS.....
TT


TT







TTS
Template Predicted Secondary structure 





.....








Template SS confidence 



























































   96...100.........110.... .....120.........130.........140.........150
 
   180.........190.........200.........210.........220.........230.........
Predicted Secondary structure 

























Query SS confidence 



























































Query Sequence  AEARTMRKLGHQNIIKFYGVGVLQEPLYLVMELAVNGALDSFLKKNEDLSVDKKTEMILQ
Query Conservation   
   
  
 




   
         

 

   
 
                     
Alig confidence 



























































Template Conservation   
  
 
  
   
  
                   

   
  
              
Template Sequence  YLSRLAAIKEFAFMKALYEEGFPVPEPIAQSRHTIVMSLVDALPMRQVSSVPDPASLYAD
Template Known Secondary structure  TT
S


TT

S
GGG



S
Template Predicted Secondary structure 






















Template SS confidence 



























































   153......160.........170.........180.........190.........200.........210..
 
   240.........250.........260........ .270.........280........
Predicted Secondary structure 



















...........














Query SS confidence 




























. . . . . . . . . . .



















Query Sequence  AAWGLEYIHGKPMLHRDIAARNCLYTDGK. . . . . . . . . . . VKISDFGLTRNGTVYQIKPN
Query Conservation 
   
  

     
  
   

      ........... 

 




           
Alig confidence 




























...........








...........
Template Conservation 
   
  

  



 



 



   
           
  



  ...........
Template Sequence  LIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIDFPQM. . . . . . . . . . .
Template Known Secondary structure  TT
S


SSS
SS
TT



TT
...........
Template Predicted Secondary structure 
























...........
Template SS confidence 



























































   213......220.........230.........240.........250.........260.
 
   289290.........300.........310.........320.........330.........340........
Predicted Secondary structure 

























Query SS confidence 



























































Query Sequence  TKSPIRWLAIETIKTMICSEKTDVWAYGVLCWEIFNNAAEPYPGMKPADVATQVANGYRM
Query Conservation          


         





 

 
 

 
 
  

       
   
  
 
 
Alig confidence  .













.......













.






















Template Conservation  .
      
 
 
  .......
       
     .                       
Template Sequence  . VSMDHPNAEMYFDR. . . . . . . DVQCIKRFFERRFH. FVSTTPGPFYKDAKKTVGKDGAK
Template Known Secondary structure  .TTSTT.......
.


SS



TT
TT

Template Predicted Secondary structure  .







........








Template SS confidence 



























































   262.......270..... ....280......... 290.........300.........310..
 
   349350. ........360.........370...
Predicted Secondary structure 


.....








Query SS confidence 


. . . . .





















Query Sequence  PPY. . . . . PHAQAEIQTMMARCNAENPNDR
Query Conservation    
.....   
  
  

  
    
  
Alig confidence 


.....





















Template Conservation   

  
           

        
 
Template Sequence  RLDAALEASGFTKKMAKDLEAAIREQQESR
Template Known Secondary structure 
GGGTTGGGT

TT
Template Predicted Secondary structure 










Template SS confidence 





























   313......320.........330.........340..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D