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Job DescriptionQ22245
Confidence100.00%DateSun Jun 30 11:14:08 BST 2013
Rank112Aligned Residues249
% Identity24%Templatec4eqmE_
PDB info PDB header:transferaseChain: E: PDB Molecule:protein kinase; PDBTitle: structural analysis of staphylococcus aureus serine/threonine kinase2 pknb
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   127..130.........140.........150.........160......... 170.........180.....
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Query Sequence  HDQITIHKKLGEGAFGEVSSGVMKFKKGMKTVQVAIKQVKLDK. TGKAKIKDFLAEARTM
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Template Sequence  NERYKIVDKLGGGGMSTVYLAE. . . . DTILNIKVAIKAIFIPPREKEETLKRFEREVHNS
Template Known Secondary structure  TTTT....TTT



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   7..10.........20........ .30.........40.........50.........60..
 
   186...190.........200.........210.........220.........230.........240.....
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Query Sequence  RKLGHQNIIKFYGVGVLQEPLYLVMELAVNGALDSFLKKNEDLSVDKKTEMILQAAWGLE
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Template Sequence  SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIK
Template Known Secondary structure  TT


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   63......70.........80.........90.........100.........110.........120..
 
   246...250.........260.. .......270.........280.........290.........300....
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Query Sequence  YIHGKPMLHRDIAARNC. LYTDGKVKISDFGLTRNGTVYQIKPNTKSPIRWLAIETIKTM
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Template Sequence  HAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAK. . . . . . . . . . . . . TVQYFSPEQAKGE
Template Known Secondary structure  TT






GGG
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   123......130.........140.........150...... ...160.........
 
   305....310.........320.........330.........340......... 350.........360
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Query Sequence  ICSEKTDVWAYGVLCWEIFNNAAEPYPGMKPADVATQVANGYRMP. . . . PYPHAQAEIQT
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Template Sequence  ATDECTDIYSIGIVLYEMLV. GEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSN
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   185....190.........200.... .....210.........220.........230.........240...
 
   361........370... ......380.........390...
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Query Sequence  MMARCNAENPNDR. PSMAEIAEILQRVTETPRPN
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Template Sequence  VILRATEKDKANRYKTIQEMKDDLSSVLHENRAN
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SSTTTS
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   244.....250.........260.........270.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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