Job Description Q22245 Confidence 100.00% Date Sun Jun 30 11:14:08 BST 2013 Rank 263 Aligned Residues 238 % Identity 23% Template c3zduA_ PDB info PDB header:transferase Chain: A: PDB Molecule:cyclin-dependent kinase-like 3; PDBTitle: crystal structure of the human cdkl3 kinase domain Resolution 2.20 Å

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	I	T	I	H	K	K	L	G	E	G	A	F	G	E	V	S	S	G	V	M	K	F	K	K	G	M	K	T	V	Q	V	A	I	K	Q	V	K	L	D	K	T	G	K	A	K	I	K	D	F	L	A	E	A	R	T	M	R	K
Query Conservation
Alig confidence																							.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.																.	.	.	.	.	.	.	.
Template Sequence		E	M	Y	E	T	L	G	K	V	G	E	G	S	Y	G	T	V	M	K	C	K	.	.	.	.	H	K	N	T	G	Q	I	V	A	I	K	I	F	Y	N	.	.	.	.	.	.	.	.	K	I	A	M	R	E	I	K	F	L	K	Q
Template Known Secondary structure														T	T								.	.	.	.		T	T	T												.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.																.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.					.	.	.	.	.	.	.	30	.	.	.	.	.	.	.									.	.	40	.	.	.	.	.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	H	Q	N	I	I	K	F	Y	G	V	G	V	L	Q	E	P	L	Y	L	V	M	E	L	A	V	N	G	A	L	D	S	F	L	K	K	N	E	D	L	S	V	D	K	K	T	E	M	I	L	Q	A	A	W	G	L	E	Y	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	H	H	E	N	L	V	N	L	I	E	V	F	R	Q	K	K	K	I	H	L	V	F	E	F	I	D	H	T	V	L	D	E	L	Q	H	Y	C	H	G	L	E	S	K	R	L	R	K	Y	L	F	Q	I	L	R	A	I	D	Y	L
Template Known Secondary structure					T	T	B										S	S	S									S										S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		H	G	K	P	M	L	H	R	D	I	A	A	R	N	C	L	Y	T	D	G	K	V	.	K	I	S	D	F	G	L	T	R	N	G	T	V	Y	Q	I	K	P	N	T	K	S	P	I	R	W	L	A	I	E	T	I	K	T	M	I	C
Query Conservation																								.
Alig confidence																								.																								.	.	.
Template Conservation																																																.	.	.
Template Sequence		H	S	N	N	I	I	H	R	D	I	K	P	E	N	I	L	V	S	Q	S	G	I	T	K	L	C	D	F	G	F	A	R	T	D	I	Y	D	D	E	V	A	T	R	W	Y	R	.	.	.	A	P	E	L	V	L	K	D	T	S	Y
Template Known Secondary structure				T	T		B					S	G	G	G					T	T									S	S		B												T	T		.	.	.						T	T		S
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	E	K	T	D	V	W	A	Y	G	V	L	C	W	E	I	F	N	N	A	A	E	P	Y	P	G	M	K	P	A	D	V	A	T	Q	V	A	N	G	Y	R	M	P	P	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.
Template Sequence		G	K	P	V	D	I	W	A	L	G	C	M	I	I	E	M	A	T	.	G	N	P	Y	L	P	S	S	S	D	L	D	L	L	H	K	I	V	L	K	V	G	N	L	S	P	H	L	Q	N	I	F	S	K	S	P	I	F	A	G	V
Template Known Secondary structure			T																	.	S	S		S	S			S	S												T															G	G	G	T	T
Template Predicted Secondary structure																				.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
																		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	A	Q	A	E	I	Q	T	M	M	A	R	C	N	A	E	N	P	N	D	R	P	S	M	A	E	I	A	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	P	Q	V	Q	H	P	K	N	A	R	K	K	Y	P	K	L	N	G	L	L	A	D	I	V	H	A	C	L	Q	I	D	P	A	D	R	I	S	S	S	D	L	L	H
Template Known Secondary structure										S	S					S	T	T	S														S	S	G	G	G	S								T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D