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Job DescriptionQ22245
Confidence100.00%DateSun Jun 30 11:14:08 BST 2013
Rank192Aligned Residues235
% Identity27%Templatec3udbF_
PDB info PDB header:transferaseChain: F: PDB Molecule:serine/threonine-protein kinase srk2e; PDBTitle: crystal structure of snrk2.6
Resolution2.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140.........150.........160.........170.........180....
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Query Sequence  LEHDQITIHKKLGEGAFGEVSSGVMKFKKGMKTVQVAIKQVKLDKTGKAKIKDFLAEART
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Template Sequence  HDSDRYELVKDIGAGNFGVARLMR. . . . DKQANELVAVKYIERGEKID. . . ENVKREIIN
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   16...20.........30......... 40.........50......... 60........
 
   185....190.........200.........210.........220.........230.........240....
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Query Sequence  MRKLGHQNIIKFYGVGVLQEPLYLVMELAVNGALDSFLKKNEDLSVDKKTEMILQAAWGL
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Template Sequence  HRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV
Template Known Secondary structure  T


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   6970.........80.........90.........100.........110.........120........
 
   245....250.........260...... ...270.........280.........290.........300.
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Query Sequence  EYIHGKPMLHRDIAARNCLYTD. . . GKVKISDFGLTRNGTVYQIKPNTKSPIRWLAIETI
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Template Sequence  SYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYT. . . . . . . . . . . . . . PAYIAPEVLL
Template Known Secondary structure  S
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   129130.........140.........150.........160.... .....170....
 
   302.......310.........320.........330.........340..... ....350......
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Query Sequence  KTMICSEKTDVWAYGVLCWEIFNNAAEPYPGMKPADVATQVANG. . . . . YRMPPYPHAQA
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Template Sequence  KKEYDGKVADVWSCGVTLYVMLV. GAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP
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SS

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   190.........200.........210.. .......220.........230.........240........
 
   357..360.........370.........380.
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Query Sequence  EIQTMMARCNAENPNDRPSMAEIAE
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Template Sequence  ECRHLISRIFVADPAKRISIPEIRN
Template Known Secondary structure  S
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TT
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   249250.........260.........270...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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