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Job DescriptionQ22245
Confidence100.00%DateSun Jun 30 11:14:08 BST 2013
Rank246Aligned Residues280
% Identity18%Templatec3txoA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:protein kinase c eta type; PDBTitle: pkc eta kinase in complex with a naphthyridine
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150.........160......... 170.........180......
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Query Sequence  DQITIHKKLGEGAFGEVSSGVMKFKKGMKTVQVAIKQVKLDK. TGKAKIKDFLAEARTMR
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Template Sequence  DNFEFIRVLGKGSFGKVMLAR. . . . VKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS
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TT....TTT

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   353......360.........370... ......380.........390.........400........
 
   187. .190.........200.........210.........220.........230.........240.....
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Query Sequence  KL. GHQNIIKFYGVGVLQEPLYLVMELAVNGALDSFLKKNEDLSVDKKTEMILQAAWGLE
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Template Sequence  LARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALM
Template Known Secondary structure  TTT
TTB


SS


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BSS

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   409410.........420.........430.........440.........450.........460........
 
   246...250.........260.........270.........280.........290.........300.....
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Query Sequence  YIHGKPMLHRDIAARNCLYTDGKVKISDFGLTRNGTVYQIKPNTKSPIRWLAIETIKTMI
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Template Sequence  FLHDKGIIYRDLKLDNVLLDHEGHCKLADF. . . . . . . GMCKEGICGTPDYIAPEILQEML
Template Known Secondary structure  TT
B




GGG
TTS



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GGG

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   469470.........480.........490........ .500.........510.........520.
 
   306...310.........320.........330.........340.........350.........360.....
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Query Sequence  CSEKTDVWAYGVLCWEIFNNAAEPYPGMKPADVATQVANGYRMPPYPHAQAEIQTMMARC
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Template Sequence  YGPAVDWWAMGVLLYEMLC. GHAPFEAENEDDLFEAILND. EVVYPTWLHEDATGILKSF
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TT.SS
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   531........540......... 550.........560......... 570.........580........
 
   366...370.........380.........390.........400.........410.........420...
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Query Sequence  NAENPNDRPSMAEIAEILQRVTETPRPNFTAIAKKEAEELLLMNSVTTKTTARRKKSN
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Template Sequence  MTKNPTMRLGSLTQGGEHAILR. . . HPFFKEIDWAQLNHRQIEPPFRPRIKSREDVSN
Template Known Secondary structure  T
SSGGGSTTSGGGT
TT...SGGGTT

TT
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STT

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   589590.........600.........610 .........620.........630.........640...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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