Return to main results Retrieve Phyre Job Id

Job DescriptionQ22245
Confidence100.00%DateSun Jun 30 11:14:08 BST 2013
Rank163Aligned Residues251
% Identity22%Templatec3sv0A_
PDB info PDB header:transferaseChain: A: PDB Molecule:casein kinase i-like; PDBTitle: crystal structure of casein kinase-1 like protein in plant
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150.........160.........170.........180.......
Predicted Secondary structure 




















Query SS confidence 



























































Query Sequence  DQITIHKKLGEGAFGEVSSGVMKFKKGMKTVQVAIKQVKLDKTGKAKIKDFLAEARTMRK
Query Conservation          

 
 

 

              



              
  
   
  
Alig confidence 




















....


















....











Template Conservation    
 
   

 
 

 

 
 ....       



        ....     
   
  
Template Sequence  NKFRLGRKIGSGSFGEIYLGT. . . . NIQTNEEVAIKLENVKTKH. . . . PQLLYESKIYRI
Template Known Secondary structure  TT





SS
....TTT

TT
SS....

Template Predicted Secondary structure 



....




....
Template SS confidence 



























































   7..10.........20....... ..30.........40...... ...50........
 
   188. 190.........200.........210.........220.........230.........240......
Predicted Secondary structure 

.























Query SS confidence 

.
























































Query Sequence  LG. HQNIIKFYGVGVLQEPLYLVMELAVNGALDSFLKKNEDLSVDKKTEMILQAAWGLEY
Query Conservation 
 .




   
         

 

   
 
                     
   
  
Alig confidence 

.
























































Template Conservation 
     
              
        
                  
   
   
  
Template Sequence  LQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEF
Template Known Secondary structure  TTTSTT


TT



BTTT


Template Predicted Secondary structure 























Template SS confidence 



























































   5960.........70.........80.........90.........100.........110........
 
   247..250.........260.... .....270.........280.........290.. ..
Predicted Secondary structure 















....




















........

Query SS confidence 

















. . . .



























. . . . . . . .

Query Sequence  IHGKPMLHRDIAARNCLY. . . . TDGKVKISDFGLTRNGTVYQIKPNTKSP. . . . . . . . IR
Query Conservation 

     
  
   

  ....     

 




               ........  
Alig confidence 

















....



























........

Template Conservation 

   
 
 

   

              


 
                         
Template Sequence  VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTAR
Template Known Secondary structure  TT




GGG

GGGTT



TT

B
TTT

B









S
TT
Template Predicted Secondary structure 














































Template SS confidence 



























































   119120.........130.........140.........150.........160.........170........
 
   295....300.........310.........320.........330..... ....340.......
Predicted Secondary structure 
















.......



Query SS confidence 








































. . . . . . .











Query Sequence  WLAIETIKTMICSEKTDVWAYGVLCWEIFNNAAEPYPGMKP. . . . . . . ADVATQVANGYR
Query Conservation    


         





 

 
 

 
 
  

     .......  
   
  
 
Alig confidence 





























.









.......











Template Conservation 
 


          






 

 

 
.
  

                        
Template Sequence  YASVNTHLGIEQSRRDDLESLGYVLMYFLR. GSLPWQGLKAGTKKQKYEKISEKKVATSI
Template Known Secondary structure  T

TT



.SS
TTSS


SSS
Template Predicted Secondary structure 











.


















Template SS confidence 



























































   179180.........190.........200........ .210.........220.........230.......
 
   348.350.........360.........370.........380.......
Predicted Secondary structure 














Query SS confidence 







































Query Sequence  MPPYPHAQAEIQTMMARCNAENPNDRPSMAEIAEILQRVT
Query Conservation     
   
  
  

  
    
  


  

   
  
 
Alig confidence 







































Template Conservation            
  

   
   
  

    
   
    
Template Sequence  EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF
Template Known Secondary structure  TTS
T

TT



Template Predicted Secondary structure 









Template SS confidence 







































   238.240.........250.........260.........270.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D