Return to main results Retrieve Phyre Job Id

Job DescriptionQ22245
Confidence100.00%DateSun Jun 30 11:14:08 BST 2013
Rank42Aligned Residues248
% Identity22%Templatec3soaA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase type ii subunit PDBTitle: full-length human camkii
Resolution3.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   127..130.........140.........150.........160.........170.........180......
Predicted Secondary structure 




















Query SS confidence 



























































Query Sequence  HDQITIHKKLGEGAFGEVSSGVMKFKKGMKTVQVAIKQVKLDKTGKAKIKDFLAEARTMR
Query Conservation           

 
 

 

              



              
  
   
 
Alig confidence 




















......
































Template Conservation     
     

 
 
  
   ......  

   


 
               

 

 
Template Sequence  TEEYQLFEELGKGSVVRRCVK. . . . . . VLAGQEYAAMIINTKKLSARDHQKLEREARICR
Template Known Secondary structure 

......TTTTS
S
Template Predicted Secondary structure 




......




Template SS confidence 



























































   10.........20.........30 .........40.........50.........60...
 
   187..190.........200.........210.........220.........230.........240......
Predicted Secondary structure 

























Query SS confidence 



























































Query Sequence  KLGHQNIIKFYGVGVLQEPLYLVMELAVNGALDSFLKKNEDLSVDKKTEMILQAAWGLEY
Query Conservation   
 




   
         

 

   
 
                     
   
  
Alig confidence 



























































Template Conservation   
 




             

 
   

 
           
     
  


  
  
Template Sequence  LLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH
Template Known Secondary structure 

BTTB


SS


B

B
S


Template Predicted Secondary structure 






















Template SS confidence 



























































   66...70.........80.........90.........100.........110.........120.....
 
   247..250.........260........ .270.........280. ........290.........300.
Predicted Secondary structure 



















....










.









Query SS confidence 





















. . . .












.



















Query Sequence  IHGKPMLHRDIAARNCLYTDGK. . . . VKISDFGLTRNGT. VYQIKPNTKSPIRWLAIETI
Query Conservation 

     
  
   

      .... 

 




    .               


  
Alig confidence 





















....












.



















Template Conservation 

   







 



        


 


 
              
     


  
Template Sequence  CHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVL
Template Known Secondary structure  TT
B



SSTTSBSSTT




SS
B


TT

B


S
S
GGG

Template Predicted Secondary structure 












































Template SS confidence 



























































   126...130.........140.........150.........160.........170.........180.....
 
   302.......310.........320.........330.........340....... ..350........
Predicted Secondary structure 


















...







Query SS confidence 













































. . .










Query Sequence  KTMICSEKTDVWAYGVLCWEIFNNAAEPYPGMKPADVATQVANGYR. . . MPPYPHAQAEI
Query Conservation         





 

 
 

 
 
  

       
   
  
 
...   
   
  
Alig confidence 






















.





















...










Template Conservation           












 .
  

           
               
   
Template Sequence  RKDPYGKPVDLWACGVILYILLV. GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA
Template Known Secondary structure  TT

B
T.SS
S


SST




TTTTTTS
Template Predicted Secondary structure 





.
















Template SS confidence 



























































   186...190.........200........ .210.........220.........230.........240....
 
   359360.........370.........380.
Predicted Secondary structure 






Query SS confidence 






















Query Sequence  QTMMARCNAENPNDRPSMAEIAE
Query Conservation    

  
    
  


  

  
Alig confidence 






















Template Conservation    

   
   
  
 
    
 
Template Sequence  KDLINKMLTINPSKRITAAEALK
Template Known Secondary structure  S
SSTTTS

Template Predicted Secondary structure 







Template SS confidence 






















   245....250.........260.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D