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Job DescriptionQ22245
Confidence100.00%DateSun Jun 30 11:14:08 BST 2013
Rank168Aligned Residues263
% Identity17%Templatec3p1aA_
PDB info PDB header:transferaseChain: A: PDB Molecule:membrane-associated tyrosine- and threonine-specific cdc2- PDBTitle: structure of human membrane-associated tyrosine- and threonine-2 specific cdc2-inhibitory kinase myt1 (pkmyt1)
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   105....110.........120.........130.........140.........150.........160....
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Query Sequence  NTEIKEGCMLVNPIRRQFWELEHDQITIHKKLGEGAFGEVSSGVMKFKKGMKTVQVAIKQ
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Template Sequence  RGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVR. . . . SKEDGRLYAVKR
Template Known Secondary structure  S

S
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TT

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   85....90.........100.........110.........120........ .130.........140
 
   165....170.........180........ .190.........200.........210.........220...
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Query Sequence  VKLDKTGKAKIKDFLAEARTMRKL. GHQNIIKFYGVGVLQEPLYLVMELAVNGALDSFLK
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Template Sequence  SMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEA
Template Known Secondary structure  SSS

S


TTB

TT



B
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   141........150.........160.........170.........180.........190.........200
 
   224.....230.........240.........250.........260.. .......270.........280..
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Query Sequence  KNEDLSVDKKTEMILQAAWGLEYIHGKPMLHRDIAARNC. LYTDGKVKISDFGLTRNGTV
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Template Sequence  WGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLL. . . . .
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TT



SGGG
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   201........210.........220.........230.........240.........250.....
 
   283......290.........300.........310.........320.........330.........340..
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Query Sequence  YQIKPNTKSPIRWLAIETIKTMICSEKTDVWAYGVLCWEIFNNAAEPYPGMKPADVATQV
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Template Sequence  . VELGVQEGDPRYMAPELL. QGSYGTAADVFSLGLTILEVAC. NMELPHG. . GEGWQQLR
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GGG

GGGG.GT

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   256...260.........270... ......280.........290..... ....300.. .......310
 
   343......350.........360.........370.........380.
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Query Sequence  ANGYRMPPYPHAQAEIQTMMARCNAENPNDRPSMAEIAE
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Template Sequence  QGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA
Template Known Secondary structure  TT


TTS
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   317..320.........330.........340.........350.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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