Job Description Q22245 Confidence 99.39% Date Sun Jun 30 11:14:08 BST 2013 Rank 414 Aligned Residues 79 % Identity 19% Template c3or8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: a tandem sh2 domain in transcription elongation factor spt6 Resolution 1.60 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		K	E	L	Y	Y	H	G	L	L	P	S	E	D	V	R	Q	L	L	S	N	.	.	N	G	D	F	L	L	R	S	S	E	P	E	P	G	S	P	R	T	H	I	L	S	V	M	F	N	N	R	L	D	D	I	N	S	I	K	H	F
Query Conservation																						.	.
Alig confidence								.														.	.																.	.	.											.	.	.	.	.
Template Conservation								.																															.	.	.											.	.	.	.	.
Template Sequence		N	H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	.	.	.	L	A	I	T	W	K	L	D	K	D	.	.	.	.	.	L	F	Q	H	V
Template Known Secondary structure				T	T			.												T	T	S		T	T								S	S		T	T		.	.	.									T	T	.	.	.	.	.
Template Predicted Secondary structure								.																															.	.	.											.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50						.	.	.	.	.
		75	.	.	.	.	80								.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.
Query Sequence		V	V	N	F	V	D	.	.	.	.	.	.	.	G	K	Y	F	I	N	D	K	M	S	F	P	S	I	Q	K	M	L	G	T	Y	Q	R	N
Query Conservation								.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	I	Q	E	L	E	K	E	N	P	L	A	L	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L	D	Q	I	I	V	E	Y	L	Q	N
Template Known Secondary structure							S		S	S	T	T	S			S					T	T				S	S								T
Template Predicted Secondary structure
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D