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Job DescriptionQ22245
Confidence100.00%DateSun Jun 30 11:14:08 BST 2013
Rank130Aligned Residues274
% Identity23%Templatec3ku2A_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of inactivated form of cdpk1 from toxoplasma gondii,2 tgme49.101440
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   127..130.........140.........150.........160.........170... ......180.....
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Query Sequence  HDQITIHKKLGEGAFGEVSSGVMKFKKGMKTVQVAIKQVKLDKTGKA. KIKDFLAEARTM
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Template Sequence  SDRYKGQRVLGKGSFGEVILCK. . . . DKITGQECAVKVISKRQVKQKTDKESLLREVQLL
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   48.50.........60......... 70.........80.........90.........100...
 
   186...190.........200.........210.........220.........230.........240.....
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Query Sequence  RKLGHQNIIKFYGVGVLQEPLYLVMELAVNGALDSFLKKNEDLSVDKKTEMILQAAWGLE
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Template Sequence  KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT
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   104.....110.........120.........130.........140.........150.........160...
 
   246...250.........260.... .....270.........280.........290.........300.
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Query Sequence  YIHGKPMLHRDIAARNCLY. . . . TDGKVKISDFGLTRNGTVYQIKPNTKSPIRWLAIETI
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Template Sequence  YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL
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   164.....170.........180.........190.........200.........210.........220...
 
   302.......310.........320.........330.........340..... ....350........
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Query Sequence  KTMICSEKTDVWAYGVLCWEIFNNAAEPYPGMKPADVATQVANG. . . YRMPPYPHAQAEI
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Template Sequence  H. GTYDEKCDVWSTGVILYILLS. GCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESA
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   224 .....230.........240..... ....250.........260.........270.........280.
 
   359360.........370.........380.. .......390.........400......
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Query Sequence  QTMMARCNAENPNDRPSMAEIAEI. . LQRVTETPRPNFTAIAKKEAEELL
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Template Sequence  KDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIR
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   282.......290.........300.........310.........320.........330.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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