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Job DescriptionQ22245
Confidence95.84%DateSun Jun 30 11:14:08 BST 2013
Rank443Aligned Residues130
% Identity15%Templatec3i0oA_
PDB info PDB header:transferaseChain: A: PDB Molecule:spectinomycin phosphotransferase; PDBTitle: crystal structure of spectinomycin phosphotransferase,2 aph(9)-ia, in complex with adp and spectinomcyin
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   136...140.........150.........160.........170.........180.........190.....
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Query Sequence  LGEGAFGEVSSGVMKFKKGMKTVQVAIKQVKLDKTGKAKIKDFLAEARTMRKLGHQNIIK
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Template Sequence  GGADTNAFAYQAD. . . . . . SESKSYFIKLKYGY. . . . . HDEINLSIIRLLHDSGIKEIIF
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   31........40... ......50....... ..60.........70.........
 
   196. ..200.........210.........220.........230.........240........
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Query Sequence  FY. . . . . . GVGVLQEPLYLVMELAVNGALDSFLKKNEDLSVDKKTEMILQAAWGLEYIH.
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Template Sequence  PIHTLEAKLFQQLKHFKIIAYPFIHAPNGFT. . . . . QNLTGKQWKQLGKVLRQIHETSVP
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   80.........90.........100.........110 .........120.........130....
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  ISIQQQLRKEIYSPKWREIVRSFYNQIEFDNSDDKLTAAFKSFFNQNSAAIHRLVDTSEK
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   135....140.........150.........160.........170.........180.........190....
 
   249250.........260.... .....270.........280.
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Query Sequence  . . . . . . . . . . GKPMLHRDIAARNCLY. TDGKVKISDFGLTRNGT
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Template Sequence  LSKKIQPDLDKYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAP
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   195....200.........210.........220.........230........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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