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Job DescriptionQ22245
Confidence100.00%DateSun Jun 30 11:14:08 BST 2013
Rank148Aligned Residues242
% Identity26%Templatec2zv2A_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase kinase 2; PDBTitle: crystal structure of human calcium/calmodulin-dependent protein kinase2 kinase 2, beta, camkk2 kinase domain in complex with sto-609
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140.........150.........160.........170.........180....
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Query Sequence  LEHDQITIHKKLGEGAFGEVSSGVMKFKKGMKTVQVAIKQVKLDKTGKAKIKDFLAEART
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Template Sequence  VQLNQYTLKDEI. . GKYGVVKLAY. . . . NENDNTYYAMKVLSKK. . . . . . . EQVYQEIAI
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   161........170.. .......180.. .......190........ .200.......
 
   185....190.........200... ......210.........220.........230.........240..
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Query Sequence  MRKLGHQNIIKFYGVGVLQ. . EPLYLVMELAVNGALDSFLKKNEDLSVDKKTEMILQAAW
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Template Sequence  LKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME. VPTLKPLSEDQARFYFQDLIK
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   241........250.........260.........270........ .280.........290.........
 
   243......250.........260.. .......270....... ..280.........290.........300
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Query Sequence  GLEYIHGKPMLHRDIAARNC. LYTDGKVKISDFGLT. RNGTVYQIKPNTKSPIRWLAIET
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Template Sequence  GIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPES
Template Known Secondary structure  TT




GGG
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GGG
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   300.........310.........320.........330.........340.........350.........
 
   301.... ....310.........320.........330.........340...... ...350......
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Query Sequence  IKTMI. . . CSEKTDVWAYGVLCWEIFNNAAEPYPGMKPADVATQVANGY. RMPPYPHAQA
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Template Sequence  LSETRKIFSGKALDVWAMGVTLYCFVF. GQCPFMDERIMCLHSKIKSQALEFPDQPDIAE
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TT


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   360.........370.........380...... ...390.........400.........410........
 
   357..360.........370.........380.
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Query Sequence  EIQTMMARCNAENPNDRPSMAEIAE
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Template Sequence  DLKDLITRMLDKNPESRIVVPEIKL
Template Known Secondary structure  T
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   419420.........430.........440...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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