Return to main results Retrieve Phyre Job Id

Job DescriptionQ22245
Confidence100.00%DateSun Jun 30 11:14:08 BST 2013
Rank154Aligned Residues245
% Identity21%Templatec2zmcA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase ttk; PDBTitle: crystal structure of human mitotic checkpoint kinase mps1 catalytic2 domain apo form
Resolution3.14 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140.........150.........160.........170.........180....
Predicted Secondary structure 






















Query SS confidence 



























































Query Sequence  LEHDQITIHKKLGEGAFGEVSSGVMKFKKGMKTVQVAIKQVKLDKTGKAKIKDFLAEART
Query Conservation 
          

 
 

 

              



              
  
   
Alig confidence 























....
.





























Template Conservation 
    
 
   

 
 

 

 
 .... .     



 
               

  
Template Sequence  VKGRIYSILKQIGSGGSSKVFQVL. . . . N. EKKQIYAIKYVNLEEADNQTLDSYRNEIAY
Template Known Secondary structure 
SS




SSS
....
.TT


TT

Template Predicted Secondary structure 




.....





Template SS confidence 



























































   520.........530.........540... . .....550.........560.........570....
 
   185.... 190.........200.........210.........220.........230.........240..
Predicted Secondary structure 

..























Query SS confidence 




. .




















































Query Sequence  MRKLG. . HQNIIKFYGVGVLQEPLYLVMELAVNGALDSFLKKNEDLSVDKKTEMILQAAW
Query Conservation 
  
 ..




   
         

 

   
 
                     
  
Alig confidence 




..


























.
























Template Conservation 
  
      

             

     
 .
                        
Template Sequence  LNKLQQHSDKIIRLYDYEITDQYIYMVMECGNID. LNSWLKKKKSIDPWERKSYWKNMLE
Template Known Secondary structure  GGG
TTB


SS


S.
SS

Template Predicted Secondary structure 

















.















Template SS confidence 



























































   575....580.........590.........600........ .610.........620.........630...
 
   243......250.........260.........270.........280.........290.........300..
Predicted Secondary structure 








































Query SS confidence 



























































Query Sequence  GLEYIHGKPMLHRDIAARNCLYTDGKVKISDFGLTRNGTVYQIKPNTKSPIRWLAIETIK
Query Conservation   
  

     
  
   

       

 




                   


   
Alig confidence 


































.....



















Template Conservation      

     
                       .....                    
Template Sequence  AVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIA. . . . . NQMDSQVGTVNYMPPEAIKD
Template Known Secondary structure  TT






GGGSSS



S

.....









TT


Template Predicted Secondary structure 






























.....



















Template SS confidence 



























































   634.....640.........650.........660........ .670.........680........
 
   303......310.........320.........330..... ....340.........350.........360
Predicted Secondary structure 














..











Query SS confidence 
































. .
























Query Sequence  TMICSEKTDVWAYGVLCWEIFNNAAEPYPGMKP. . ADVATQVANGYRMPPYPHAQAEIQT
Query Conservation        





 

 
 

 
 
  

     ..  
   
  
 
   
   
  
  
Alig confidence 





















.









..
























Template Conservation          





 

 

 
.
  

                          
     
Template Sequence  MSKISPKSDVWSLGCILYYMTY. GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQD
Template Known Secondary structure 



S.SS
TTSS



TTS






S
Template Predicted Secondary structure 






.






















Template SS confidence 



























































   698.700.........710......... 720.........730.........740.........750......
 
   361........370.........380.
Predicted Secondary structure 






Query SS confidence 




















Query Sequence  MMARCNAENPNDRPSMAEIAE
Query Conservation 

  
    
  


  

  
Alig confidence 




















Template Conservation 

   
  

  


  


 
Template Sequence  VLKCCLKRDPKQRISIPELLA
Template Known Secondary structure  T
SSTTTS

T
Template Predicted Secondary structure 







Template SS confidence 




















   767..770.........780.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D