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Job DescriptionQ22245
Confidence100.00%DateSun Jun 30 11:14:08 BST 2013
Rank198Aligned Residues244
% Identity20%Templatec2qr8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal protein s6 kinase alpha-3; PDBTitle: 2.0a x-ray structure of c-terminal kinase domain of p90 ribosomal s62 kinase 2 (rsk2)
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   127..130.........140.........150.........160.........170.........180......
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Query Sequence  HDQITIHKKLGEGAFGEVSSGVMKFKKGMKTVQVAIKQVKLDKTGKAKIKDFLAEARTMR
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Template Sequence  TDGYEVKEDIGVGSYSVCKRCI. . . . HKATNMEFAVKIIDKSKRD. . . . . . PTEEIEILL
Template Known Secondary structure  TTT
SS....TTTTTTT

......T
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   419420.........430.........440 .........450......... 460........
 
   187 ..190.........200.........210.........220.........230.........240.....
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Query Sequence  K. LGHQNIIKFYGVGVLQEPLYLVMELAVNGALDSFLKKNEDLSVDKKTEMILQAAWGLE
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Template Sequence  RYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVE
Template Known Secondary structure  TTSTTB


SS


S
BT
TT

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   469470.........480.........490.........500.........510.........520........
 
   246...250.........260....... ..270........ .280.........290.........
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Query Sequence  YIHGKPMLHRDIAARNCLYTDG. . . . . KVKISDFGLTR. NGTVYQIKPNTKSPIRWLAIE
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Template Sequence  YLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPE
Template Known Secondary structure  TT
S


GGGSSSS

GGG


TT

B
TTS
B

SS


S


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   529530.........540.........550.........560.........570.........580........
 
   300.........310.........320.........330..... ....340.........350 ...
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Query Sequence  TIKTMICSEKTDVWAYGVLCWEIFNNAAEPYPGMKP. . . ADVATQVANGYRMPP. . . YPH
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Template Sequence  VLERQGYDAACDIWSLGVLLYTMLT. GYTPFANGPDDTPEEILARIGSGKFSLSGGYWNS
Template Known Secondary structure  .SS
SS
SSTTS
T



SST
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   589590.........600.........610... ......620.........630.........640.......
 
   354.....360.........370.........380.
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Query Sequence  AQAEIQTMMARCNAENPNDRPSMAEIAE
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Template Sequence  VSDTAKDLVSKMLHVDPHQRLTAALVLR
Template Known Secondary structure  S
S
SSTTTS

T
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   648.650.........660.........670.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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