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Job DescriptionQ22245
Confidence100.00%DateSun Jun 30 11:14:08 BST 2013
Rank73Aligned Residues256
% Identity36%Templatec2qobA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ephrin receptor; PDBTitle: human epha3 kinase domain, base structure
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   124.....130.........140.........150.........160.........170.........180...
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Query Sequence  ELEHDQITIHKKLGEGAFGEVSSGVMKFKKGMKTVQVAIKQVKLDKTGKAKIKDFLAEAR
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Template Sequence  ELDATNISIDKVVGAGEFGEVCSGRLK. LPSKKEISVAIKTLKVG. YTEKQRRDFLGEAS
Template Known Secondary structure  B

GGG
SSS.
TTS


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   615....620.........630.........640. ........650........ .660.........670..
 
   184.....190.........200.........210.........220.........230.........240...
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Query Sequence  TMRKLGHQNIIKFYGVGVLQEPLYLVMELAVNGALDSFLKKNEDLSVDKKTEMILQAAWG
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Template Sequence  IMGQFDHPNIIRLEGVVTKSKPVMIVTEMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG
Template Known Secondary structure  TT


TTB


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TT
BTTTT
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   673......680.........690.........700.........710.........720.........730..
 
   244.....250.........260......... 270.........280.........290.........300..
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Query Sequence  LEYIHGKPMLHRDIAARNCLYTDGKV. KISDFGLTRNGTVYQIKPNTKSPIRWLAIETIK
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Template Sequence  MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR. . . . . . . . . VLKIPIRWTSPEAIA
Template Known Secondary structure  TT
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TT
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   734.....740.........750.........760......... 770.........780....
 
   303......310.........320.........330.........340.........350.........360..
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Query Sequence  TMICSEKTDVWAYGVLCWEIFNNAAEPYPGMKPADVATQVANGYRMPPYPHAQAEIQTMM
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Template Sequence  YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLM
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TTT

TTTT

T



TT
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   798.800.........810.........820.........830.........840.........850.......
 
   363......370.........380.........390
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Query Sequence  ARCNAENPNDRPSMAEIAEILQRVTETP
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Template Sequence  LDCWQKDRNNRPKFEQIVSILDKLIRNP
Template Known Secondary structure  T
SSGGGS

SG
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   858.860.........870.........880.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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