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Job DescriptionQ22245
Confidence100.00%DateSun Jun 30 11:14:08 BST 2013
Rank283Aligned Residues230
% Identity21%Templatec2qkrA_
PDB info PDB header:transferaseChain: A: PDB Molecule:cdc2-like cdk2/cdc28 like protein kinase; PDBTitle: cryptosporidium parvum cyclin-dependent kinase cgd5_25102 with indirubin 3'-monoxime bound
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140.........150.........160.........170.........180.........190.
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Query Sequence  IHKKLGEGAFGEVSSGVMKFKKGMKTVQVAIKQVKLDKTGKAKIKDFLAEARTMRKLGHQ
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Template Sequence  MEKYLEKVGEGVVYKAKD. . . . . . SQRIVALKRIS. . . . . . . . . . TAIREISLLKELHHP
Template Known Secondary structure  S
B


B





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T
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   20.........30....... ..40........ .50.........60...
 
   192.......200.........210.........220.........230.........240.........250.
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Query Sequence  NIIKFYGVGVLQEPLYLVMELAVNGALDSFLKKNEDLSVDKKTEMILQAAWGLEYIHGKP
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Template Sequence  NIVSLIDVIHSECL. TLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR
Template Known Secondary structure  TB




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S
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TT
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   80.........90... ......100.........110.........120.........130........
 
   252.......260.........270.........280.........290.........300.........310.
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Query Sequence  MLHRDIAARNCLYTDGKVKISDFGLTRNGTVYQIKPNTKSPIRWLAIETIKTMICSEKTD
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Template Sequence  ILHRDLKPQNLLINSDALKLADFGLARAFGIPVRVVTLWYR. . . APDVLMGSKKYSTSVD
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GGG






TT
TTS






TT
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   140.........150.........160.........170.........180 .........190......
 
   312.......320.........330.........340.........350.
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Query Sequence  VWAYGVLCWEIFNNAAEPYPGMKPADVATQVANGYRMPPY. . . . . . . . . . . . . . . . . . . .
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Template Sequence  IWSIGCIFAEMIT. GKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVF
Template Known Secondary structure  .SS
S


SSGGG



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   203......210..... ....220.........230.........240.........250.........260.
 
   352.......360.........370.........380..
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Query Sequence  . . . . . . . . . PHAQAEIQTMMARCNAENPNDRPSMAEIAEI
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Template Sequence  EKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH
Template Known Secondary structure 
B

STT

S
S
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TS
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   262.......270.........280.........290.........300.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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